DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and H2.0

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster


Alignment Length:401 Identity:97/401 - (24%)
Similarity:152/401 - (37%) Gaps:101/401 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPTTRLASKPFPKPFSIESLIANQTPATATPPSPPEERDQEQEAEQEQELSARAMVASSALGLTQ 81
            |||:..::......||::.|:.          |.|||..::..:..    |.::....|.|....
  Fly    60 SPTSATSTTKVKLSFSVDRLLG----------SEPEESHRQSSSSP----STKSCCDGSILACCS 110

  Fly    82 FPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHA------ 140
            ||      |.:...|.|             |...||...           ||...||.:      
  Fly   111 FP------HCFSQANAE-------------SRRFGHATL-----------PPTFTPTSSHTYPFV 145

  Fly   141 -LEKQLP-PTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGR 203
             |:|..| |.:.:....|..|.. ||...|||   |..||    .:.:.....|.:.||.    :
  Fly   146 GLDKLFPGPYMDYKSVLRPTPIR-AAEHAAPT---YPTLA----TNALLRFHQHQKQQHQ----Q 198

  Fly   204 MHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNY 268
            .|..|.:|.....|...||  |:|...|...:|:.                |.:.:.||...:.:
  Fly   199 HHHHQHHPKHLHQQHKPPP--HNSTTASALLAPLH----------------SLTSLQLTQQQQRF 245

  Fly   269 NGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRR---RTAFTSEQ 330
            .|:..:........|.:...:    |.|::...|.||.:.|||.|:.::..|:|   |..|::.|
  Fly   246 LGKTPQQLLDIAPTSPAAAAA----ATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQ 306

  Fly   331 LLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGL------------TS 383
            ...||.:|..:||::..:|.::|..|.|::.|||:||||||.||:..:..|            .|
  Fly   307 RKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPES 371

  Fly   384 HGLGRNGTTSG 394
            .|:.:..|.||
  Fly   372 GGVFKTSTPSG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 22/51 (43%)
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 25/59 (42%)

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