DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and CG11294

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster


Alignment Length:197 Identity:50/197 - (25%)
Similarity:73/197 - (37%) Gaps:69/197 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 KSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR------ 376
            :.||.||.||.:||.|||..|....|..:..|.::|..:.|||.:|::|||||||||::      
  Fly    23 RQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQL 87

  Fly   377 -----------------VKAGLTSHGLGR---------------------------NGTTSGTKI 397
                             :..|....|.|.                           ||..||:..
  Fly    88 LQDAWRMRCLSLGTPPVMGGGAVQGGSGNGATARPPSQTPENLSSASKDSELAEVGNGPNSGSFT 152

  Fly   398 VVPIPVHVNRFAVRSQHQQ-----------LEKMCLSGPKPDLRKKLS-AEAIGGFEKFSGSTNA 450
            :    :|.   |.:.||||           .:|:..:..:..|.|..| ...:||....||.::.
  Fly   153 M----MHP---AFQQQHQQQQHQGHQQATDQDKLSKTYTELKLYKAPSHGMELGGMAALSGHSDE 210

  Fly   451 SS 452
            .|
  Fly   211 GS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 25/51 (49%)
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 25/51 (49%)

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