DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and hoxd11a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571242.1 Gene:hoxd11a / 30405 ZFINID:ZDB-GENE-990415-117 Length:276 Species:Danio rerio


Alignment Length:229 Identity:58/229 - (25%)
Similarity:90/229 - (39%) Gaps:68/229 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 SYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQA----------NPG--------------M 213
            ||....|:|::|.:.|.:   |.:.:.....|:...|          |.|              .
Zfish    78 SYYSTEEIMHRDLLQSTN---RAEMIFKNDSMYSHHAGTNSSCSFFTNVGRNGVLPQGFDQFFET 139

  Fly   214 AQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNG 278
            |..::|.|.|:...|             |..:..|..|                 |...|.:.. 
Zfish   140 ANSEKPNPEQSKQKP-------------DTSVPGDAAC-----------------NPSTDSAEQ- 173

  Fly   279 AYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKY 343
              |..|..|..::|.:.|.        .|.:.|..||.:|||::|..::..|:.||||||....|
Zfish   174 --TKQDPTDTVEEESSVST--------CDEEKNSGSSATKSRKKRCPYSKYQIRELEREFFFNVY 228

  Fly   344 LSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            ::..:|.|::..|.|::.||||||||||.|.|::
Zfish   229 INKEKRLQLSRMLSLTDRQVKIWFQNRRMKEKKL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 23/51 (45%)
hoxd11aNP_571242.1 DUF3528 23..144 CDD:432284 12/68 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..207 22/108 (20%)
Homeodomain 205..261 CDD:459649 25/55 (45%)

Return to query results.
Submit another query.