DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxd9a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571201.3 Gene:hoxd9a / 30350 ZFINID:ZDB-GENE-990415-121 Length:262 Species:Danio rerio


Alignment Length:235 Identity:61/235 - (25%)
Similarity:88/235 - (37%) Gaps:70/235 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHS 226
            |:.|.|:.....|.....|.:..||.|. :.....|::..| .|.:..:.|..  .|..||:...
Zfish    70 PSTAAVSGIYHPYVHQTHLSDNRYVRSW-IEPVANHISLTG-FHPNSRHSGTK--TESLPPKRTE 130

  Fly   227 SPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDD 291
            |.|                   ||....|..:.||                    |:.||  |.|
Zfish   131 SAA-------------------FETETPSVPEFSL--------------------NAVSE--SAD 154

  Fly   292 EGAQSRHEGGGMGGKDSQGNGSSSNSK-------------------SRRRRTAFTSEQLLELERE 337
            :..:.|      .|.|:..:|...:.|                   :|::|..:|..|.||||:|
Zfish   155 KATEER------VGSDNSSHGEPKDEKQQQQLDPSNPAANWIHARSTRKKRCPYTKYQTLELEKE 213

  Fly   338 FHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            |....||:...|.::|..|.|:|.||||||||||.|.|::
Zfish   214 FLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKM 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 26/51 (51%)
hoxd9aNP_571201.3 Hox9_act 1..182 CDD:461369 32/162 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..187 23/129 (18%)
Homeodomain 196..252 CDD:459649 28/55 (51%)

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