Protein Alignment unpg and Hoxb13

DIOPT Version :10

• Sequence 1: NP_477146.1
• Gene: unpg / 35942
• FlyBaseID: FBgn0015561
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001100511.1
• Gene: Hoxb13 / 303480
• RGDID: 1309113
• Length: 286
• Species: Rattus norvegicus
• Alignment Length: 288
• Identity: 74/288 - (25%)
• Similarity: 107/288 - (37%)
• Gaps: 60/288 - (20%)

  Fly   112 SSP-AGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYR 175
            ||| |.||||           |...|..:.....||.:...|......|..|..|..||....|
  Rat    31 SSPLASHPAA-----------PTLMPTVNYAPLDLPGSAEPPKQCHPCPGVPQGASPAPVPYGY- 83

  Fly   176 RLAELMNQDY----VHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSP 236
                 ....|    |...|:....|....|....|..| ||......||  :....|...|.:.|
  Rat    84 -----FGGGYYSCRVSRSSLKPCAQTATLATYPSETPA-PGEEYPSRPT--EFAFYPGYPGPYQP 140

  Fly   237 MEPALDVGMDEDFECSGDSCSDISLTMS-------PRNYNGEM----DKSRNGAYTNSDSEDCS- 289
            |...|||.:.:.....|:...|..|.:.       ...:|.:|    :::..|.:..:...:.|
  Rat   141 MASYLDVSVVQTLGAPGEPRHDSLLPVDSYQPWALAGGWNSQMCCQGEQNPPGPFWKAAFAEPSV 205

  Fly   290 ---DDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQ 351
               ..:|...|                    :.|::|..::..||.|||||:.|.|:::..:|.:
  Rat   206 QHPPPDGCAFR--------------------RGRKKRIPYSKGQLRELEREYAANKFITKDKRRK 250

  Fly   352 IATSLKLSEVQVKIWFQNRRAKWKRVKA 379
            |:.:..|||.|:.|||||||.|.|:|.|
  Rat   251 ISAATSLSERQITIWFQNRRVKEKKVLA 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
unpg	NP_477146.1	Homeodomain	324..376	CDD:459649	23/51 (45%)
Hoxb13	NP_001100511.1	HoxA13_N	12..124	CDD:463521	28/110 (25%)
		Homeodomain	219..275	CDD:459649	25/55 (45%)