DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Nkx1-1

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_234082.6 Gene:Nkx1-1 / 298981 RGDID:1564874 Length:443 Species:Rattus norvegicus


Alignment Length:451 Identity:120/451 - (26%)
Similarity:161/451 - (35%) Gaps:155/451 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PSSPAGHPAAQQPQAQAQP--QPPPPHPPTHALE----KQLPPTLPH----PL---DTRFLPFNP 162
            |::|...||...|....:|  .|.||.|...|.:    :...|..|.    ||   ||  :|..|
  Rat     6 PAAPGDIPALPPPPPPPEPGSGPAPPAPAATARDAMDGRAELPIFPRAGVPPLAVSDT--VPAVP 68

  Fly   163 AAAGVA-------PTDLSYRRLAELMNQDYVHS------------------LSVHARLQHMAAAG 202
            ..||.|       ||..|   :.::::.:..:|                  .:..|.:...||:|
  Rat    69 DGAGAARPAAPPRPTSFS---VLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAACVPVPAASG 130

  Fly   203 RMHEDQ-------ANPGMAQL--QEPT-------PPQAHSSPAKSGS-HSPMEPALDVGMDED-F 249
            |....:       |..|:|..  .|||       ..:|.::...||| .||...:.|...:|| .
  Rat   131 RSPRAELERRALSAATGVAAATGAEPTSTGDSYRADEAEANGYSSGSGRSPTADSEDEAPEEDED 195

  Fly   250 ECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDE--------------GAQSRHEG 300
            |.......|:..|..||..:|.:....:|....::.|....||              |......|
  Rat   196 EDQAPEVQDVQGTEEPRGGSGGLGARGSGCSGAAEVEASPVDEAAAPGPRGNSPGAPGPPVTAAG 260

  Fly   301 GGMGGKDSQG-----------NGSSSNS-KSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIA 353
            .|..|...||           .||.|.| |.||.|||||.|||:.||.:|.|.:|||:.||..:|
  Rat   261 AGNAGSTPQGAAVATKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLA 325

  Fly   354 TSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLE 418
            .||.|:|.||||||||||.|||:...|                                      
  Rat   326 LSLSLTETQVKIWFQNRRTKWKKQNPG-------------------------------------- 352

  Fly   419 KMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGLGVGVGVGVGVGLGVSTPLS 479
                                         .:.|:|:||..|.|.|.|.|.|:..|:| |||
  Rat   353 -----------------------------ADTSAPTGGGGGPGPGAGPGAGLPGGLS-PLS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 33/51 (65%)
Nkx1-1XP_234082.6 Homeodomain 292..348 CDD:459649 36/55 (65%)

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