DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and gbx2

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:358 Identity:145/358 - (40%)
Similarity:188/358 - (52%) Gaps:86/358 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LIAGGCYLPSSPA-------GHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLP-HPLDTRFLP 159
            ||.|    |..|:       |:|.....::...|.||||.||| ..:..||.|.| ||     :|
Zfish    27 LIGG----PPQPSPGHFVYTGYPMFMPYRSVVLPPPPPPPPPT-LPQSALPTTHPHHP-----IP 81

  Fly   160 FNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQ---EPTP 221
            ..|::                    :..||:     |.||....:        ||.|.   ..:|
Zfish    82 GLPSS--------------------FCSSLA-----QGMALTSTL--------MATLPGGFSSSP 113

  Fly   222 PQAHSSPA-KSGS---HSPMEPALDVGMD-EDFE--CSGDSCSDISL-------TMSPRNYNGEM 272
            .|.|...| |.||   |:..:.:.|:.:| ||.:  .:.||.|..|.       |.:.|.::.:.
Zfish   114 SQQHQDAARKLGSQSIHAMFDKSQDIRLDGEDGKTFATKDSTSIPSFHDSQSVHTSTVRGHSKDD 178

  Fly   273 DKS-----RNGAYT-NSDSEDCSDDEGAQS----RHEGGGMGGKDS---QGNG---SSSNSKSRR 321
            .|.     ::.::: :||.:..|||.|..:    :.:|.|.||.|.   .|||   ::|..|:||
Zfish   179 SKEDDCHRKDESFSMDSDLDYSSDDNGPGNAMCQKEDGDGSGGLDDGVHGGNGAGNTTSTGKNRR 243

  Fly   322 RRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGL 386
            ||||||||||||||:|||.|||||||||||||.:|||||||||||||||||||||||||..:...
Zfish   244 RRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNVNSKT 308

  Fly   387 GRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEK 419
            |.  .:...||||||||||:|||:||||||||:
Zfish   309 GE--PSRNPKIVVPIPVHVSRFAIRSQHQQLEQ 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 47/51 (92%)
gbx2NP_694496.1 Homeodomain 242..298 CDD:459649 51/55 (93%)

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