DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Cdx4

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_031700.1 Gene:Cdx4 / 12592 MGIID:88362 Length:282 Species:Mus musculus


Alignment Length:331 Identity:75/331 - (22%)
Similarity:119/331 - (35%) Gaps:98/331 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LEKQ---LPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAG 202
            |||:   .|.||..|..:.......:....:|...|....|.:    |.|    :....||:   
Mouse     7 LEKEAGMYPGTLRSPGGSSTAGVGTSGGSGSPLPASNFTAAPV----YPH----YVGYPHMS--- 60

  Fly   203 RMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPAL--DVGMDE---------DFECSGDSC 256
              :.|...|.:.....|     :|.|.:..|..|..|:.  .|.|::         |:...|.: 
Mouse    61 --NMDPHGPSLGAWSSP-----YSPPREDWSTYPGPPSTMGTVPMNDMTSPVFGSPDYSTLGPT- 117

  Fly   257 SDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRR 321
                   |..:..|.:..:.:.:..:.||........::|||.......|..|..|.:...:  :
Mouse   118 -------SGASNGGSLPDAASESLVSLDSGTSGATSPSRSRHSPYAWMRKTVQVTGKTRTKE--K 173

  Fly   322 RRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGL 386
            .|..:|..|.||||:|||..:|:::..:|::|.:|.|||.||||||||||||.:::         
Mouse   174 YRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKM--------- 229

  Fly   387 GRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNAS 451
                                                      ::||:|.     ||...||..:.
Mouse   230 ------------------------------------------IKKKISQ-----FENTGGSVQSD 247

  Fly   452 SPSGGP 457
            |.|..|
Mouse   248 SGSISP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 28/51 (55%)
Cdx4NP_031700.1 Caudal_act 13..168 CDD:461413 33/180 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..36 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..156 10/65 (15%)
Homeodomain 173..228 CDD:459649 29/54 (54%)

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