DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and ATHB54

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001322131.1 Gene:ATHB54 / 10723019 AraportID:AT1G27045 Length:252 Species:Arabidopsis thaliana


Alignment Length:155 Identity:37/155 - (23%)
Similarity:48/155 - (30%) Gaps:64/155 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDS 285
            ||.:||:...|.|....|.|.   |||:     |.|....:.        |:.|.|.        
plant    31 PPSSHSAFYGSSSMINTETAT---MDEE-----DVCESYMMR--------EITKKRK-------- 71

  Fly   286 EDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERS 350
                                                    .|..||..||..|..:|.|....:.
plant    72 ----------------------------------------LTPIQLRLLEESFEEEKRLEPDRKL 96

  Fly   351 QIATSLKLSEVQVKIWFQNRRAKWK 375
            .:|..|.|...||.:|||||||::|
plant    97 WLAEKLGLQPSQVAVWFQNRRARYK 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 21/52 (40%)
ATHB54NP_001322131.1 HOX 68..121 CDD:197696 22/100 (22%)
HALZ 123..161 CDD:460477
Blue background indicates that the domain is not in the aligned region.

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