DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and nkx1-1

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002936812.1 Gene:nkx1-1 / 100493120 XenbaseID:XB-GENE-488879 Length:408 Species:Xenopus tropicalis


Alignment Length:416 Identity:117/416 - (28%)
Similarity:162/416 - (38%) Gaps:111/416 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LHGYFAQNH--ERLT--HLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTL 149
            |||....:|  :|||  .|.|.||  |....|                 .||..:|         
 Frog    30 LHGEMMDSHGEQRLTASDLPAYGC--PRDRQG-----------------DHPNCNA--------- 66

  Fly   150 PHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMA 214
                     |..|.:.|.||  |:..|.......|.:.....:::.:|.:.|.:...|....|..
 Frog    67 ---------PAGPESLGAAP--LAVHRTTSFSVLDILDPNKFNSKQRHCSGAYKPPGDYILRGEE 120

  Fly   215 QLQEP---TPPQA----HSSPAKSG---------SHSPME----------PALDVGMDEDFECSG 253
            :.:.|   |..:|    :.|..||.         .||..|          |..|:..:||.|...
 Frog   121 KAEGPDIATGQKAFLEEYESCKKSTEVIKEEGLYQHSATEDCQTQEFSPSPGSDLEEEEDEEEDE 185

  Fly   254 DSCSDISLTMSPR----------NYNGEMDKSRNGAYTNSDSED-CSDDEGAQSRHEGGGMGGKD 307
            :.||:.|...:|.          |..|| |....||...|:.:. ...::..|::|     |...
 Frog   186 EICSEESSNSTPSGLAERDPGAGNGQGE-DALNTGAPAGSNQQQPTGKNQQQQNQH-----GKPK 244

  Fly   308 SQGNGSSSNS-KSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRR 371
            .:..||.|.| |.||.|||||.|||:.||.:|.:.:|||:.||..:|.||.|:|.||||||||||
 Frog   245 RKRTGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRR 309

  Fly   372 AKWKRVKAGL--------TSHGLGRNGTTSGTKIVVPI---PVHVNRFAVRSQHQQLEK-----M 420
            .|||:...|.        :.||.|.:|:..|..: .|:   |...|..|:...|.....     |
 Frog   310 TKWKKQNPGADTSAPTGGSGHGGGGSGSVLGGGL-SPLSHSPPMGNPMALHGHHGYPSHAPGGLM 373

  Fly   421 C------LSGPKPDLRK-KLSAEAIG 439
            |      |.||...|.. .||:::.|
 Frog   374 CTAQLPFLPGPAAVLSPFVLSSQSYG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 32/51 (63%)
nkx1-1XP_002936812.1 Homeodomain 258..314 CDD:459649 35/55 (64%)

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