DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxa6

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002933441.2 Gene:hoxa6 / 100485428 XenbaseID:XB-GENE-481964 Length:237 Species:Xenopus tropicalis


Alignment Length:193 Identity:57/193 - (29%)
Similarity:82/193 - (42%) Gaps:40/193 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 PQAHSSPAKSGSHSPMEPALDVGMDEDFECSGD------SC--SDISLTMSPRNYNGEMDKSRNG 278
            |.|:.||.......| .|......:....|:|:      ||  |....:.||.:| |...:..:|
 Frog    39 PGAYGSPPVQDKPYP-SPCFYQQSNTLIACNGNSYEYGASCFYSGKESSGSPSSY-GTKHRGDSG 101

  Fly   279 AYTNSDSEDCSDDEGAQSRHEGGGMGGK---------------------DSQGNGSSSNSKSRRR 322
            .|.:..::        |.:::.....||                     .:...|....:..||.
 Frog   102 EYLHFSAD--------QQQYKSASAQGKMLHEEPTDRKYSSPVYPWMQRVNSCTGPVYGAHGRRG 158

  Fly   323 RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR-VKAGLTSH 384
            |..:|..|.||||:|||..:||:...|.:||.:|.|:|.|:||||||||.|||: .|..|.||
 Frog   159 RQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESKLLLPSH 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 28/51 (55%)
hoxa6XP_002933441.2 Homeodomain 156..212 CDD:459649 31/55 (56%)

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