DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and nkx3-1

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_012814889.1 Gene:nkx3-1 / 100038192 XenbaseID:XB-GENE-479027 Length:211 Species:Xenopus tropicalis


Alignment Length:217 Identity:64/217 - (29%)
Similarity:89/217 - (41%) Gaps:81/217 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 MNQDYVHSLSVHAR----------LQHMAAAGRMHEDQANPGMAQLQE-----------PTPPQA 224
            |:|.....||:.|:          |.|: ..||..:...:|...|.|:           |...|:
 Frog     1 MSQQGTEDLSLPAKPLKSFLIQDILSHI-GPGRKEKSLDSPKTDQDQDSSLGGKKENCTPEKQQS 64

  Fly   225 HSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCS 289
            .|.||:. .||.||       ||:.|.      |.:..:||      ::|               
 Frog    65 SSQPAEM-HHSQME-------DENVEL------DQAQPISP------VEK--------------- 94

  Fly   290 DDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIAT 354
                                    ....:.:|.|.||:..|::||||:|.::||||..||:|:|.
 Frog    95 ------------------------KLKLQQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAK 135

  Fly   355 SLKLSEVQVKIWFQNRRAKWKR 376
            ||||:|.||||||||||.|.||
 Frog   136 SLKLTETQVKIWFQNRRYKTKR 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 32/51 (63%)
nkx3-1XP_012814889.1 Homeodomain 101..157 CDD:459649 34/55 (62%)

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