DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxd10

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_031749087.1 Gene:hoxd10 / 100038085 XenbaseID:XB-GENE-485204 Length:274 Species:Xenopus tropicalis


Alignment Length:263 Identity:61/263 - (23%)
Similarity:104/263 - (39%) Gaps:59/263 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 FLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGR------------------ 203
            :||  ..|..|:|:|.|.:......:.....:||..:.|.|:.....                  
 Frog    15 YLP--GCAYYVSPSDFSSKSSFFSQSSSCPMTLSYSSNLTHVQPVREVAFREYGLERTKWQYRGT 77

  Fly   204 ----------MHEDQANPGMAQ----------LQEPTPPQA----HSSPAKSGSHSPMEPALDVG 244
                      ||.|...|...:          .....||.:    :||..::|       .|..|
 Frog    78 YPSYYPSEEVMHRDLIQPANRRSDMLFKSDSVCNHHGPPSSQSNFYSSVGRNG-------ILPQG 135

  Fly   245 MDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQ 309
            .|:.::.|.:....:.:...|    .:.|.....|.|.:.|   :.|:...:....|...|:..:
 Frog   136 FDQFYDSSQNQGYQVGMEEQP----AKSDPKATNAPTKAPS---TQDKKVTNDSSPGTPSGEAEK 193

  Fly   310 GNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW 374
            .| ||::.:.|::|..::..|:.||||||....|::..:|.|::..|.|::.||||||||||.|.
 Frog   194 SN-SSASQRLRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKE 257

  Fly   375 KRV 377
            |::
 Frog   258 KKL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 23/51 (45%)
hoxd10XP_031749087.1 DUF3528 41..144 CDD:432284 16/109 (15%)
Homeodomain 203..259 CDD:459649 25/55 (45%)

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