Protein Alignment Rad51D and rad51d

DIOPT Version :8

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001005687.1
• Gene: rad51d / 448189
• XenbaseID: XB-GENE-1014974
• Length: 320
• Species: Xenopus tropicalis
• Alignment Length: 313
• Identity: 77/314 (25%)
• Similarity: 137/314 (44%)
• Gaps: 77/314 (25%)

  Fly    11 CTGRLLSEYQLNLLRKNNICSLIDFYDADEKKLHELWAIN---IQSVR----------------- 55
            |.|  ||...:.:|:.||:.::||...:|.::|....:::   :.:||
 Frog     9 CPG--LSAGIVAVLKANNVKTVIDLVASDLEELARKCSLSYKTLMAVRRVLLAQYSAFPSSGADV 71

  Fly    56 --ELKKELSLLPKGSVDEGTPDFNYDTGIEELDKLLDSVEQPFKPGRVWELCGQPGVGKTQLLYT 118
              |||...::||              ||..:||.||||   ....|.|.|:.|..|.||||...:
 Frog    72 YEELKSSTAILP--------------TGNRKLDILLDS---GLYTGEVTEIAGAAGSGKTQTCQS 119

  Fly   119 LALNFVWKHSQAVLFIDTKREFSCKRIQDMLRAREVDEEASERAMKGIRVVQAATGADINDLLKS 183
            :|:|..:...|.||::||....:..|:..::::|...|:....:::.|.|::      :.|:.|.
 Frog   120 IAVNVAYNLKQTVLYVDTTGGLTASRLLQLVQSRTKSEDEQVASLQRIEVIR------VFDIYKL 178

  Fly   184 FD------HQLTAETHASMQ-TKLVLIDSL-AACFAFYRGRRMRDVRKSVLTELACKIRKLAL-R 239
            ||      ||::.:...|.: .:||::||: |..:....|:....:  :::.:||.:::.||. .
 Frog   179 FDAFQDLRHQISQQLLRSGEPLRLVIVDSVCAVIYPMLGGKHTEGM--AIMMQLARELQTLAHDY 241

  Fly   240 GVAFVIGNVSFFENNKDSCGDDGEQNGDDEEVTRQQLEPMLGSYWSSVATLRL 292
            .:|.:|.|         |...||....          .|.||..||.|.:.|:
 Frog   242 HLAILISN---------SITKDGATGN----------RPALGRSWSFVPSTRI 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	59/223 (26%)
		radB	80..335	CDD:236482	59/223 (26%)
rad51d	NP_001005687.1	RecA-like_NTPases	82..298	CDD:333705	61/239 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010
OrthoDB	1	1.010				D1214879at2759
OrthoFinder	1	1.000				FOG0007565
OrthoInspector	0	0.000	Not matched by this tool.
Phylome	1	0.910		0.667	Consistency score
RoundUp	1	1.030		avgDist	Average_Evolutionary_Distance	R4853
TreeFam	1	0.960
	7	6.820