Protein Alignment Rad51D and rad51b

DIOPT Version :8

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_998577.1
• Gene: rad51b / 406721
• ZFINID: ZDB-GENE-040426-2750
• Length: 373
• Species: Danio rerio
• Alignment Length: 371
• Identity: 86/372 (23%)
• Similarity: 147/372 (40%)
• Gaps: 85/372 (23%)

  Fly     8 LQTCTGRLLSEYQLNLLRKNNICSLIDFYDADEKKLHELWAINIQSVRELKKELSLLPKGSVD-- 70
            |:||.. :||..|:.|.|...:.     |.|         |:|:|  |.:.|..:.....::|
Zfish    24 LETCQD-VLSVTQVELSRLAGLS-----YPA---------ALNLQ--RLVSKACAPAVITALDLW 71

  Fly    71 EGTPDFNYDTGIEELDKLLDSVEQPFKPGRVWELCGQPGVGKTQLLYTLALNFVWKHS-----QA 130
            :...:..:.|.:..||:||..   ....|.:.|:.|..|.|||||...|::......|     ..
Zfish    72 KRKEELCFSTSLPALDRLLHG---GLPRGALTEVTGPSGCGKTQLCMMLSVLATLPKSLGGLDSG 133

  Fly   131 VLFIDTKREFSCKRIQDMLRAR-----EVDEEASERAMKGIRVVQAATGADINDLLKSFDHQLTA 190
            |::|||:..||.:|:.:|.::|     .|.|...|.|.: :.:.:..|..|:...|:..:..:.|
Zfish   134 VIYIDTESAFSAERLVEMAQSRFPEFFSVKERLLEMAAR-VHLFRELTCQDVLKRLERLEEDIIA 197

  Fly   191 ETHASMQTKLVLIDSLAACFAFYRGRRMRDV--------RKSVLTELACKIRKLALR-GVAFVIG 246
                 .:..||::||:|:..     |:..|.        |.:.|.:.|..::.|:.. .:..|:.
Zfish   198 -----CRAGLVILDSVASVV-----RKEFDTSLPGNLTHRSNFLGQEAAVLKYLSQEFCIPVVLT 252

  Fly   247 N-VSFFENNKDSCGDDGEQNGDDEE----VTRQQLEPMLGSYWSSVATLRLSVELPEEE------ 300
            | ::.....|..|....:.:...||    ||     ..||:.||.....||.|:..:.|
Zfish   253 NQITTHVGEKLHCPQWNQTDASFEEDSGFVT-----AALGNTWSHSVNTRLIVQYEDSERRQIVI 312

  Fly   301 -----------DFTLQDDGLRFIYVISNTYGPDGEHCLLRITDAGV 335
                       .:|:|.:|:|    :.....|  |....|.||.|:
Zfish   313 AKSPVAPFAVLSYTIQKEGIR----LEENMNP--ESFSNRGTDPGL 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	70/298 (23%)
		radB	80..335	CDD:236482	70/296 (24%)
rad51b	NP_998577.1	Rad51	65..332	CDD:285604	64/286 (22%)
		Rad51_DMC1_radA	79..333	CDD:238543	63/273 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900