Protein Alignment Rad51D and Rad51c

DIOPT Version :9

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_036012127.1
• Gene: Rad51c / 114714
• MGIID: 2150020
• Length: 409
• Species: Mus musculus
• Alignment Length: 164
• Identity: 46/164 - (28%)
• Similarity: 67/164 - (40%)
• Gaps: 41/164 - (25%)

  Fly   103 ELCGQPGVGKTQLLYTLALN------FVWKHSQAVLFIDTKREFSCKRIQDM---------LRAR 152
            |:||.||||||||...||::      |.....:|| ||||:..|...|:..:         |.|.
Mouse   228 EVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEAV-FIDTEGSFMVDRVVSLATACIQHLHLIAG 291

  Fly   153 EVDEEASERAMKGIRVVQAATGA------DINDLLKSF--------DHQLTAETHASMQTKLVLI 203
            ...||..::|:|...:....:..      |..:||...        ||.         :.:||:|
Mouse   292 THTEEEHQKALKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHP---------KVQLVII 347

  Fly   204 DSLAACFAFYRGRRMRDVRKSVLTELACKIRKLA 237
            |.:|  |.|........:|..:|..||.::..||
Mouse   348 DGIA--FPFRHDLEDLSLRTRLLNGLAQQMISLA 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	46/164 (28%)
		radB	80..335	CDD:236482	46/164 (28%)
Rad51c	XP_036012127.1	radA	127..409	CDD:235273	46/164 (28%)
		Rad51C	224..>393	CDD:410900	46/164 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810