DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and mfsd10

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001017667.1 Gene:mfsd10 / 550360 ZFINID:ZDB-GENE-050417-154 Length:450 Species:Danio rerio


Alignment Length:563 Identity:108/563 - (19%)
Similarity:202/563 - (35%) Gaps:175/563 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAEINAI------------ET 83
            |||:.|....|..|:    ::....:::.||:::.      .|....:.::            ||
Zfish    19 VVFLALLLDLLGFTL----ILPLLPSILDHYSQTG------DNVYQSLQSVVDWFRGAVGAPMET 73

  Fly    84 ELQPYVANLF--LARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSS 146
            :   |.:.||  |..:|. |::........|:.||.|||||||:::.||..||:::.|    .|.
Zfish    74 K---YNSVLFGGLIGSLY-SLLQFLSSPITGALSDDYGRKPLLLLTTIGLMASYVLWA----FSH 130

  Fly   147 YYVVNPWWYIMAAVPHSLLGGNCVFSVAAFC--FISDITDCKSRPYRMIFMESLFFIGLTSGSLL 209
            .:.|    ::::.:    :||.|..:| :.|  .::|:...|:|...|..:...|.:|.|.|.|:
Zfish   131 SFTV----FLLSRI----VGGICKGNV-SLCTAIVADLPCPKARNKGMAMIGVAFSLGFTLGPLM 186

  Fly   210 SSFVYAAVGSAATI--GISGCIVTFA---TLFIIFFVPESLHFHKEQETKNAI-TANVEKECIDS 268
            .::....:..|...  |.:...|.|:   .|||.|.:||:|.       |.|. ::.::::..|.
Zfish   187 GAYFALRLKDAEVFYQGPAMLAVLFSLADLLFIFFMLPETLQ-------KGASESSGLQQQSGDL 244

  Fly   269 KVPITACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEER 333
            ..|:...             ||                              ..|.|......|:
Zfish   245 LHPVALF-------------NF------------------------------TAVRRTENPPSEQ 266

  Fly   334 KRQEAEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLFVR 398
            |.|..:                                  ::.|..|..:|:|.|:...:.....
Zfish   267 KMQNLK----------------------------------VLGLVYFTYLFLFSGLEFTLSFLTH 297

  Fly   399 EKFHWT--VRDYTFFETVSHLVPMIGALIGFL------ILRKVFRLSVVTLALLAFFSEILNNLA 455
            ::|.::  .:...||        .||..:..:      .:|...::..|::|::......|    
Zfish   298 QRFQFSSMQQGKMFF--------FIGITMAVIQGGYARRIRPGHQIQSVSMAIITLIPAFL---- 350

  Fly   456 KGFATMPWHMYLSVTLGVF-----RSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFA----PF 511
              ...:.|::.|..: |:|     .:|..|...|.||.....|..|.:..|...|.:.|    |.
Zfish   351 --LVGIAWNLTLLYS-GLFLYSFAAAIVVPCLSTQVSGHGSASQKGTVMGILRSLGALARALGPI 412

  Fly   512 VAAPLYTLIYKRSLTTYPGLFNFVSSFLYLLSFVFIGYVLRIK 554
            ||:.:|.|....       |...:||..:::..:.:.   |:|
Zfish   413 VASSVYWLAGAE-------LCLIISSVFFIVPLILLS---RLK 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 90/470 (19%)
MFS_1 101..>261 CDD:284993 45/167 (27%)
MFS_1 375..>558 CDD:284993 38/197 (19%)
mfsd10NP_001017667.1 MFS 71..445 CDD:119392 98/499 (20%)
MFS_1 77..411 CDD:284993 86/446 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.