DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and slcr-46.2

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_507773.1 Gene:slcr-46.2 / 180270 WormBaseID:WBGene00012811 Length:475 Species:Caenorhabditis elegans


Alignment Length:536 Identity:93/536 - (17%)
Similarity:205/536 - (38%) Gaps:127/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VFMLLFSHTLSGT----IQRNQVIYQTCTVIFHYNESD--CKQLDVKNASAEINAIETELQPYVA 90
            |:..:|.:.|:.:    :.::.:.|:.|..:.:..|.:  ||.   |...|..|::.:     ::
 Worm     3 VYTTIFLYALTSSVFFPVFQSLIFYKACITLSNSTEPEIACKS---KETYARDNSVHS-----MS 59

  Fly    91 NLFLARTLLESIVPA-FCGLFIGSWSDHYGRKPLLIVSMIG-FSASFLMMAAICELSSYYVVNPW 153
            ::.|..:.....|.| |...::|..||...||...::..|| |.:.|.::..:.    |..::|:
 Worm    60 SVILMASSTGLCVSAFFTSRWVGHLSDVKSRKLAFLIPFIGLFISDFTILIQVL----YPRLSPY 120

  Fly   154 WYIMAAVPHSLLGGNCVFSVAAFCFISDI-TDCKSRPYRMIFMESLFFIGLTSGSLLSSFVYAAV 217
            ::|::.|.:...||....:..||..:|.: :|.:.|...:..:|....:|.|.|.|:||      
 Worm   121 YFIVSEVIYGFFGGYMSITSGAFSIVSTMHSDQRERAKGIARLEGTISLGSTVGFLISS------ 179

  Fly   218 GSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITACDLQLDRV 282
             .....|..|....|.....|.|:  |..|.::.|     ..:::::|:..|......||     
 Worm   180 -QLKNFGYLGAASFFLVAHFIAFM--SAVFMRDPE-----KPDLQEKCVKRKPFCHGTDL----- 231

  Fly   283 AIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEEQAKKAGL 347
                    :.|::|        ||                                         
 Worm   232 --------LKDKKP--------PT----------------------------------------- 239

  Fly   348 FSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLFVREKFHWTVRDYTFFE 412
                      ||..|           ::..:...|.|.|.|...:::.:::.:|.|...::.:.:
 Worm   240 ----------STNLK-----------ILYFSFACSYFAFIGSTRILFFYLKHRFFWGAEEFGYLK 283

  Fly   413 TVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWH---MYLSVTLGVF 474
            .::..:..|.:|..:..|:.:    .:|...||.|..:..::.:.:..:.|.   :::.|...:|
 Worm   284 AMNTGMTTIMSLALYPFLKNL----GITDIRLAIFGLLTRSIGRAWYAVAWEGWTVFIVVFFEMF 344

  Fly   475 RSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGLFNFVSSFL 539
            ........|:.::..|...:.|..||:..|:::.....::.::.|.:..||..:|.| :||...:
 Worm   345 SKFPATAMRSSIATNVGEHERGLAFSLVAVIEALCNLTSSWVFHLAWPLSLNVFPQL-SFVIMPI 408

  Fly   540 YLLSFVFIGYVLRIKY 555
            .:|..:.: .:|.::|
 Worm   409 IILPAITL-MILNMRY 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 79/451 (18%)
MFS_1 101..>261 CDD:284993 38/162 (23%)
MFS_1 375..>558 CDD:284993 32/184 (17%)
slcr-46.2NP_507773.1 MFS 58..419 CDD:391944 80/467 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3339
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48502
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001349
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.930

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