DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and bmpr2a

DIOPT Version :10

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_005165892.1 Gene:bmpr2a / 562822 ZFINID:ZDB-GENE-070618-1 Length:1013 Species:Danio rerio


Alignment Length:516 Identity:156/516 - (30%)
Similarity:251/516 - (48%) Gaps:102/516 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ESNNI-CETDGFCFTSVEKNSDGSIIFSYRCLHKSQIFPPGRSIWCNDGLH---------GGPTA 190
            |::.| |.....||....|.::|.::....|             |.|.|.|         ..|.:
Zfish    58 ENSTIRCYQGHRCFGLWGKKNNGVVLVKQGC-------------WTNVGDHQECYDRCVVTNPPS 109

  Fly   191 RPVGRNGAHA-CCKDRDFCN-RFLWPKTKD-----QRSDRVEEGRQISVQDYVPHRLTSWEFVAI 248
              |.:||.:. ||.::|.|| .|    |:|     ..:.:..:.|::..::.:...|.:...||:
Zfish   110 --VAQNGTYRFCCCNKDMCNLNF----TEDFPPPSPTTAQPLQSRRLHREEVIVVALATVSMVAV 168

  Fly   249 ILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILNGNTTIH--DIIEMTTSGSGSAG 311
            :    :.:.|.|          .||..||              |..::|  :|:|...|.     
Zfish   169 L----VILLFFG----------YRMLRGR--------------GKHSLHTLNILETALSP----- 200

  Fly   312 LPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHE 376
             |.|...::..|    .:||:||:|.|:|......:||||:|.|.....:..|..||: ::|.||
Zfish   201 -PSLDLDNLTLQ----ELIGRGRYGTVYRASLDDRSVAVKVFISANRQQFTNERMIYR-LLLDHE 259

  Fly   377 NILGFIAADNKDNGT--WTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLSIATGLAHLHMDI 439
            ||..|:.::.: .||  .|:..|:.:::.:|||..||:...||..:...::||:..|||:||.:|
Zfish   260 NIARFLESEER-VGTEGRTEFLLLLEFYPHGSLCTYLSGRTVDWLSCCRLALSVTRGLAYLHTEI 323

  Fly   440 VGTRG---KPAIAHRDLKSKNILVKSNLSCAIGDLGLAV--------RHVEKNDSVDIPSTHRVG 493
              .||   |||::||||.|:|:|||::.||.|.|.||::        .|.|:::|    :...||
Zfish   324 --QRGDVYKPAVSHRDLNSRNVLVKTDGSCVISDFGLSMILTGKRPPGHGEEDNS----AISEVG 382

  Fly   494 TKRYMAPEVLDESMNDQHFDS-YKRADVYAFGLILWEIARRCN---MGMIYDEYQLPYYDVVQPD 554
            |.||||||||:.::|.:..:| .|:.||||.||:.||...||.   .|.....:||.:...|...
Zfish   383 TVRYMAPEVLEGAVNLRDCESALKQVDVYALGLVYWETFMRCADLFPGETVPAFQLAFQAEVGNH 447

  Fly   555 PSIEEMKKVVCIEKCRPNIPNRWHASDV-LHNMAKVMKECWYPNPVARLTALRIKKTLASI 614
            |:||:|:.:|..||.||..|..|..:.: :|::.:.|::||..:..|||||...::.||.:
Zfish   448 PTIEDMQALVSREKERPKFPEAWKENSLTVHSLKETMEDCWDQDAEARLTAQCAEERLAEL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 21/85 (25%)
GS 294..324 CDD:197743 6/31 (19%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 114/305 (37%)
bmpr2aXP_005165892.1 TFP_LU_ECD_BMPR2 32..134 CDD:467134 23/94 (24%)
STKc_BMPR2_AMHR2 212..508 CDD:270956 114/303 (38%)

Return to query results.
Submit another query.