DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and acvr1

DIOPT Version :10

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001017357.1 Gene:acvr1 / 550111 XenbaseID:XB-GENE-478850 Length:512 Species:Xenopus tropicalis


Alignment Length:535 Identity:253/535 - (47%)
Similarity:336/535 - (62%) Gaps:55/535 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LPIYI----AQPSAKKPENKI-----KCHCD--TCKESNNICETDGFCFTSVEKNSDGSIIFSYR 164
            |||.:    :.||.:..|.|:     ||.|:  :|...::.....  ||.|: .|:||.::....
 Frog     8 LPILMMVAFSSPSMEDEEMKLNAGQYKCVCEGMSCGSGDHCYGQQ--CFASL-SNNDGVLVSQKG 69

  Fly   165 CLHKSQIFPPGRSIWCNDGLHGGPTARPVGRNGAHACCKDRDFCNRFLWPKTKDQRSDRVEEGRQ 229
            |.   |::..|: :.|.         .|..::.|..||:. |.||..:..|..| .:.|.::|  
 Frog    70 CF---QVYEQGK-MTCK---------TPPSQDQAVECCQS-DLCNMNITVKITD-LTGRTKQG-- 117

  Fly   230 ISVQDYVPHRLTSW----EFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPIL 290
             ...:|....||.:    ..|.::|.....:.|....     ||..:|.|.|     |:.|..|.
 Frog   118 -EAPNYSVETLTIFILAPVIVLVVLSVLAVLIFRKIQ-----QRHMQMLSNR-----DAEYGTID 171

  Fly   291 N------GNTTIHDIIEMT-TSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENV 348
            .      |::|:.::::.: |||||| |||.||||::|||:.|...:||||:||||||.|:||:|
 Frog   172 GLIASNVGDSTLAEMLDHSCTSGSGS-GLPFLVQRTVARQITLAECVGKGRYGEVWRGLWQGESV 235

  Fly   349 AVKIFSSREECSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTT 413
            ||||||||:|.|||||.|:|.||:|||||||||||:|.....:.|||||:|.|||.|||:|||..
 Frog   236 AVKIFSSRDEKSWFRETELYNTVLLRHENILGFIASDMTSRNSSTQLWLITHYHELGSLYDYLQV 300

  Fly   414 HPVDTNTMLNMSLSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHV 478
            ..:|:.|.|.:.||||:||||||::|.||:|||||:||||||||:|||.|..|.|.||||||.|.
 Frog   301 TTLDSVTCLRIVLSIASGLAHLHVEIFGTQGKPAISHRDLKSKNVLVKKNGQCCIADLGLAVMHS 365

  Fly   479 EKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEY 543
            :..:.:|:.:..|||||||||||||||::....||||||.|:|||||:|||:|||.....|.:||
 Frog   366 QTTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIYAFGLVLWEVARRMVSNGIVEEY 430

  Fly   544 QLPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIK 608
            :.|:||||..|||.|:||||||:::.||||||||.:...|..:||:||||||.||.|||||||||
 Frog   431 KPPFYDVVPNDPSFEDMKKVVCVDQQRPNIPNRWFSDPTLTALAKLMKECWYQNPSARLTALRIK 495

  Fly   609 KTLASISVE-DKVKN 622
            |||..|... ||:|:
 Frog   496 KTLTKIDNSLDKLKS 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 20/89 (22%)
GS 294..324 CDD:197743 16/30 (53%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 184/286 (64%)
acvr1NP_001017357.1 TFP_LU_ECD_ALK2 33..103 CDD:467065 21/86 (24%)
TGF_beta_GS 182..209 CDD:462503 14/27 (52%)
STKc_ACVR1_ALK1 205..502 CDD:271044 189/296 (64%)

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