DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and put

DIOPT Version :10

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster


Alignment Length:534 Identity:163/534 - (30%)
Similarity:250/534 - (46%) Gaps:103/534 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IKC-HCDTCKESNNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQIFPPGRSIW----------- 179
            |:| |.|     ..:|.|...|.|.:|           .|..::..||....:|           
  Fly    34 IECEHFD-----EKMCNTTQQCETRIE-----------HCKMEADKFPSCYVLWSVNETTGILRI 82

  Fly   180 ----CNDGLHG------GPTARPVGRNG-AHACCKDRDFCN------RFLWPKTKDQRSDRVEEG 227
                |...:|.      ..:|.|  |.| .|.||.....||      :.....|.....::.::|
  Fly    83 KMKGCFTDMHECNQTECVTSAEP--RQGNIHFCCCKGSRCNSNQKYIKSTTEATTQVPKEKTQDG 145

  Fly   228 RQISVQDYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILNG 292
            ..: :..|:...:.|...|.:.:|..|:             ||::.|........::        
  Fly   146 SNL-IYIYIGTSVFSVLMVIVGMGLLLY-------------RRRKQAHFNEIPTHEA-------- 188

  Fly   293 NTTIHDIIEMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSRE 357
                    |:|.|.      |||..|.|    ||......||||:||:.:...::||||||..:|
  Fly   189 --------EITNSS------PLLSNRPI----QLLEQKASGRFGDVWQAKLNNQDVAVKIFRMQE 235

  Fly   358 ECSWFREAEIYQTVMLRHENILGFIAAD-NKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTM 421
            :.||..|.:||:...:||.|||.|:..: :.|.   .:.||::.|..||||.|||.:|.:....:
  Fly   236 KESWTTEHDIYKLPRMRHPNILEFLGVEKHMDK---PEYWLISTYQHNGSLCDYLKSHTISWPEL 297

  Fly   422 LNMSLSIATGLAHLHMDIVGTRG---KPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDS 483
            ..::.|:|.||||||.:|..::.   ||:|||||.||||:|:||:|:..|.|.|||:........
  Fly   298 CRIAESMANGLAHLHEEIPASKTDGLKPSIAHRDFKSKNVLLKSDLTACIADFGLAMIFQPGKPC 362

  Fly   484 VDIPSTH-RVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPY 547
            .|   || :|||:||||||||:.::|... |::.|.||||.||:|||:..||:......|:|||:
  Fly   363 GD---THGQVGTRRYMAPEVLEGAINFNR-DAFLRIDVYACGLVLWEMVSRCDFAGPVGEFQLPF 423

  Fly   548 YDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLA 612
            ...:...||::|:::.|.::|.||.:.|.|.|...|:.....|:|||..:..|||::..:.:..|
  Fly   424 EAELGLRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNVFCDTMEECWDHDAEARLSSSCVMERFA 488

  Fly   613 SI----SVEDKVKN 622
            .:    |.:..:||
  Fly   489 QLNKYPSTQLLIKN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 24/111 (22%)
GS 294..324 CDD:197743 8/29 (28%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 116/295 (39%)
putNP_001262575.1 TFP_LU_ECD_ACVR2 33..125 CDD:467135 24/108 (22%)
STKc_ACVR2 206..493 CDD:270955 116/293 (40%)

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