DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and acvr1ba

DIOPT Version :10

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_005162281.1 Gene:acvr1ba / 30183 ZFINID:ZDB-GENE-980526-527 Length:519 Species:Danio rerio


Alignment Length:524 Identity:274/524 - (52%)
Similarity:344/524 - (65%) Gaps:66/524 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IKCHCDTCKESNNICETDGFCFTSVEKNSDGSIIFSY----------RCLHKSQIFPPGRSIWCN 181
            :||:|..|:.:..:|||||.|..|.          ||          .|:.:..:.|||:.|:| 
Zfish    32 LKCNCTACESTGYVCETDGACMAST----------SYINGQEEQQVRICIPRVSLVPPGQPIYC- 85

  Fly   182 DGLHGGPTARPVGRNGAHACCKDRDFCNRFLWPKTKDQRSDRVEEGRQISVQDYVPH-------R 239
                    ....|....|.|.  .||||..         :.::..|.......|:.:       :
Zfish    86 --------LSAKGLLNTHCCY--TDFCNSI---------NLQIPNGSSTGQTQYLSNVWGIADGK 131

  Fly   240 LTSW---EFVAIILGATLFIC---FTGTSTWYYCQR----RKRMASGRTFAKEDSAYDPI-LNGN 293
            ..||   |.||:|.|.....|   ..|...:.:.||    |:|:      ..||.:.|.: |..:
Zfish   132 GGSWGPVELVAVIAGPVFLFCLLLIVGVLLFQHHQRNYNHRQRL------DVEDPSCDHLYLAKD 190

  Fly   294 TTIHDII-EMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSRE 357
            .|:.|:| :::|||||| ||||.|||::||.:.|..:||||||||||||||||.:||||||||||
Zfish   191 KTLQDLIFDLSTSGSGS-GLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIFSSRE 254

  Fly   358 ECSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTML 422
            |.|||||||||||:|||||||||||||||||||||||||||:||||:|||||||..:.|....|:
Zfish   255 ERSWFREAEIYQTIMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNHYSVTIEGMI 319

  Fly   423 NMSLSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDSVDIP 487
            .:|||.|:|||||||:|:||:|||.||||||||||||||.|.:|||.||||||||....|::||.
Zfish   320 KLSLSAASGLAHLHMEILGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGLAVRHESITDTIDIA 384

  Fly   488 STHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPYYDVVQ 552
            ...|||||||||||||||::|.:||||:|.||:||.||:.||||||||.|.|:::|||||||:|.
Zfish   385 PNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARRCNAGGIHEDYQLPYYDLVP 449

  Fly   553 PDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLASISVE 617
            .|||||||:||||.::.|||:||.|.:.:.|..|.|:|:||||.|..||||||||||||:.:||:
Zfish   450 SDPSIEEMRKVVCDQRLRPNVPNWWQSYEALRVMGKIMRECWYANGAARLTALRIKKTLSQLSVQ 514

  Fly   618 DKVK 621
            :.:|
Zfish   515 EDIK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 25/92 (27%)
GS 294..324 CDD:197743 18/30 (60%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 207/286 (72%)
acvr1baXP_005162281.1 TFP_LU_ECD_ALK4 31..103 CDD:467066 24/91 (26%)
TGF_beta_GS 192..219 CDD:462503 16/27 (59%)
STKc_TGFbR1_ACVR1b_ACVR1c 225..512 CDD:271045 207/286 (72%)

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