DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and acvr1c

DIOPT Version :10

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_021334502.1 Gene:acvr1c / 100331105 ZFINID:ZDB-GENE-181207-1 Length:491 Species:Danio rerio


Alignment Length:505 Identity:249/505 - (49%)
Similarity:338/505 - (66%) Gaps:47/505 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IKCHCDTCKESNNICET--DGFCFTSVEK-NSDGSIIFSYRCLHKSQIFPPGRSIWCNDGLHGGP 188
            :||.|..|  .|:.|||  :|.|:.||.. |.....:.|  |:..|::  .|: ::|..      
Zfish    23 LKCVCHLC--VNHTCETEAEGACWNSVMLINGKEETVKS--CVSPSEL--KGQ-VFCYS------ 74

  Fly   189 TARPVGRNGAHACCKDRDFCNRFLWPKTKDQRSDRVEEGRQISVQDYVPHRLTSW---EFVAIIL 250
                 .||.:...|...||||                 ...:.:....|...:.|   |..|:||
Zfish    75 -----SRNVSKRNCCFTDFCN-----------------NETLHLNPEQPPEDSGWSQLEVAAVIL 117

  Fly   251 GATLFICFTGTSTWYYCQRRKRMASGRTFAK--EDSAYDP-ILNGNTTIHDII-EMTTSGSGSAG 311
            ..:..:| .|........:..|....::..:  |:...|| :::.:..:.::| :|:|||||| |
Zfish   118 VPSCLVC-VGVMLGVCAIQNLRCTHIKSLKQDPEEPLDDPTLVSPDKCLKELIYDMSTSGSGS-G 180

  Fly   312 LPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHE 376
            |||||||:|||.:.|...||||||||||||:||||:|||||||||:|.|||||||||||:||||:
Zfish   181 LPLLVQRTIARTIVLQETIGKGRFGEVWRGKWRGEDVAVKIFSSRDERSWFREAEIYQTIMLRHD 245

  Fly   377 NILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLSIATGLAHLHMDIVG 441
            ||||||||||||||:|||||||::|||:|||||||....|....|:.::||||:|:|||||:|:|
Zfish   246 NILGFIAADNKDNGSWTQLWLVSEYHEHGSLFDYLNRFTVSVEGMIVLALSIASGIAHLHMEIIG 310

  Fly   442 TRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDSVDIPSTHRVGTKRYMAPEVLDES 506
            |:|||||||||:||||||||.|.:..|.||||||:|....:::|||..||||||||||||:||:|
Zfish   311 TQGKPAIAHRDIKSKNILVKKNGAAVIADLGLAVKHDSNTNTIDIPINHRVGTKRYMAPEILDDS 375

  Fly   507 MNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPYYDVVQPDPSIEEMKKVVCIEKCRP 571
            :|...|:|:||||:|:..|:.||:||||::..|::::||||||.||.|||:::|::|||.:|.||
Zfish   376 INMSSFESFKRADIYSLSLVFWELARRCSIQGIHEDFQLPYYDQVQSDPSLDDMRRVVCEQKLRP 440

  Fly   572 NIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLASISVEDKVK 621
            ||||:|.:.:.|..|.|:|:|||:.||.|||||||:|||::.::|...||
Zfish   441 NIPNQWQSCEALRVMGKIMRECWHANPAARLTALRVKKTISQVTVVKDVK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 24/85 (28%)
GS 294..324 CDD:197743 19/30 (63%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 189/286 (66%)
acvr1cXP_021334502.1 TFP 22..96 CDD:480272 25/107 (23%)
TGF_beta_GS 165..191 CDD:462503 17/26 (65%)
STKc_TGFbR1_ACVR1b_ACVR1c 197..483 CDD:271045 189/285 (66%)

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