DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and aen

DIOPT Version :8

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_001072399.2 Gene:aen / 779853 XenbaseID:XB-GENE-949418 Length:360 Species:Xenopus tropicalis

Alignment Length:233 Identity:75/234 (32%)
Similarity:103/234 (44%) Gaps:37/234 (16%)


  Fly   986 TIPSESSSGSPTNLSNPF-LEEIVSPMLGNLSADATLQPLQSDEMPQSGDLVAMDAEFVTLNPEE 1049
            |:|....|....|..:.| .::....:.|:.|:.....||   ...:.|..||:|.|.|...   
 Frog   108 TLPVAPGSSITGNKPSTFDYDDSGLSVAGSSSSSRASSPL---SWLKPGKCVAIDCEMVGTG--- 166

  Fly  1050 NEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDAN 1114
                |.||.:       .:||.|.:..:|..    ..|.||..:..:.||.|::|||....|...
 Frog   167 ----PGGKIS-------ELARCSIVNYRGDV----VYDKYIKPELPIADYRTRWSGITKHSLKNA 216

  Fly  1115 FSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDT--VHLFH----MPHH 1173
            .|.|  ||.|   :.||.|.|..|  |||.|.||||.:..:.|..||.||  :.|..    :|..
 Frog   217 ISFK--TAQK---EILKILKDKRV--VGHALHNDFRALKYFHPHSQIRDTSKISLLKKNAGLPEK 274

  Fly  1174 RMVSLRFLAWHFLGTKIQ--SETHDSIEDARTTLQLYK 1209
            ..|||:.||.:.||.:||  ...|.|:|||..:|:|||
 Frog   275 AGVSLKTLALNLLGKRIQVGRNGHSSVEDALASLELYK 312

Known Domains:


GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:330360
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:315986
zf-CCCH_2 799..816 CDD:317060
PAN2_exo 1036..1209 CDD:99846 64/181 (35%)
aenNP_001072399.2 DnaQ 150..>323 CDD:223916 66/189 (35%)
DnaQ_like_exo 156..312 CDD:299142 64/181 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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