DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and REXO4

DIOPT Version :10

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_065118.2 Gene:REXO4 / 57109 HGNCID:12820 Length:422 Species:Homo sapiens


Alignment Length:441 Identity:98/441 - (22%)
Similarity:156/441 - (35%) Gaps:144/441 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 KSPSHTSQPNAVNNSPNG----------------RQKSWFP----LTFTMGINDQGEVQVQTQSD 863
            |.|:  |.|.||...|..                :|||..|    :...||...:.::..|.:.:
Human    47 KKPA--SGPGAVVRPPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKE 109

  Fly   864 AS---------SGK------------SEQEEETEKPPTK--GLDNNRMYALHAVVCQVDDGTQKN 905
            .|         :||            |:.:.....|.||  |.::|:            .||::.
Human   110 TSPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNK------------KGTKER 162

  Fly   906 LVSLINVQRP--YHTMKLAESADDPQSQWYIFNDFSISPVSP-QESVWFTLDWKVPCILFYRHVE 967
            ....|..:|.  .|..:.|:.|               :|..| :|.:||                
Human   163 TNGDIVPERGDIEHKKRKAKEA---------------APAPPTEEDIWF---------------- 196

  Fly   968 DDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGNLSADATLQPLQSDEMPQS 1032
            ||.:.|..              |::.|       |...:|....||......:|..::.......
Human   197 DDVDPADI--------------EAAIG-------PEAAKIARKQLGQSEGSVSLSLVKEQAFGGL 240

  Fly  1033 GDLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVV 1097
            ...:|:|.|.|.:.|:..|              ...||:|.:...|..    ..|.|:...|.|.
Human   241 TRALALDCEMVGVGPKGEE--------------SMAARVSIVNQYGKC----VYDKYVKPTEPVT 287

  Fly  1098 DYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQII 1162
            ||.|..|||:|.:|      |:...|:...:::..::. |.|.|||.|.||.:|:.:..|.::|.
Human   288 DYRTAVSGIRPENL------KQGEELEVVQKEVAEMLK-GRILVGHALHNDLKVLFLDHPKKKIR 345

  Fly  1163 DTVHLFHMPHHRMV-----SLRFLAWHFLGTKIQSETHDSIEDARTTLQLY 1208
            ||..  :.|....|     |||.|:...||.::|...|.||:||:..::||
Human   346 DTQK--YKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:475233
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:463872 30/165 (18%)
zf-CCCH_2 799..816 CDD:464217
PAN2_exo 1036..1209 CDD:99846 53/178 (30%)
REXO4NP_065118.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..194 33/175 (19%)
REX4_like 244..394 CDD:99847 51/176 (29%)
Blue background indicates that the domain is not in the aligned region.

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