Protein Alignment PAN2 and CG6833

DIOPT Version :8

• Sequence 1: NP_610427.2
• Gene: PAN2 / 35893
• FlyBaseID: FBgn0033352
• Length: 1241
• Species: Drosophila melanogaster
• Sequence 2: NP_001189105.1
• Gene: CG6833 / 39559
• FlyBaseID: FBgn0036405
• Length: 290
• Species: Drosophila melanogaster
• Alignment Length: 297
• Identity: 77/298 (26%)
• Similarity: 121/298 (41%)
• Gaps: 78/298 (26%)

  Fly   968 DDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGNLSADATLQPLQ------- 1025
            |.|.|.|..:...|:|                    .:.:|||........|:::.||
  Fly    21 DSSRSGSANNKNTTDS--------------------TKNVVSPQHNQRKLQASMERLQVQQVNTS 65

  Fly  1026 -----SDEMPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIK-------------PCHM------ 1066
                 |:.|..:|...|..|.....:.:..|..|..|:|.::             .|.|
  Fly    66 RRAAGSNWMAAAGGGAAAAAGSENQDAKATESAPLSKSARMRMKKKAHRNRILAMDCEMVGVGHN 130

  Fly  1067 ----SVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSY 1127
                .:||:|.:...|..    .:|.|:..:::|.||.|..|||:|.|: ||  .:...|::...
  Fly   131 TRDDMLARVSIVNRMGHV----LLDKYVKPRKEVTDYRTSVSGIRPQDI-AN--GEDFAAVQNEV 188

  Fly  1128 QKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMV------SLRFLAWHFL 1186
            .||.:    |.|.|||||:||..|:.|..|...|.||.|  :.|..:::      ||:.|....|
  Fly   189 MKLIH----GRILVGHGLRNDLAVLGIRHPFHDIRDTSH--YKPLCKLISNTHTPSLKRLTKAVL 247

  Fly  1187 GTKIQSETHDSIEDARTTLQLYKH----YLKLQEEKK 1219
            |.:||:..|:|:||||..:.:|..    :.|..|:|:
  Fly   248 GQEIQTGEHNSVEDARAAMGIYNRVAVDWEKYLEKKR 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PAN2	NP_610427.2	WD40	63..>270	CDD:330360
		WD40 repeat	148..183	CDD:293791
		WD40 repeat	187..221	CDD:293791
		WD40 repeat	227..273	CDD:293791
		WD40 repeat	278..314	CDD:293791
		UCH_1	505..940	CDD:315986
		zf-CCCH_2	799..816	CDD:317060
		PAN2_exo	1036..1209	CDD:99846	59/202 (29%)
CG6833	NP_001189105.1	DnaQ	100..>283	CDD:223916	57/196 (29%)
		REX4_like	118..270	CDD:99847	53/165 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG0847
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
	1	0.900