Protein Alignment PAN2 and CG6833

DIOPT Version :10

• Sequence 1: NP_610427.2
• Gene: PAN2 / 35893
• FlyBaseID: FBgn0033352
• Length: 1241
• Species: Drosophila melanogaster
• Sequence 2: NP_648689.1
• Gene: CG6833 / 39559
• FlyBaseID: FBgn0036405
• Length: 290
• Species: Drosophila melanogaster
• Alignment Length: 297
• Identity: 77/297 - (25%)
• Similarity: 121/297 - (40%)
• Gaps: 78/297 - (26%)

  Fly   968 DDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGNLSADATLQPLQ------- 1025
            |.|.|.|..:...|:|                    .:.:|||........|:::.||
  Fly    21 DSSRSGSANNKNTTDS--------------------TKNVVSPQHNQRKLQASMERLQVQQVNTS 65

  Fly  1026 -----SDEMPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIK-------------PCHM------ 1066
                 |:.|..:|...|..|.....:.:..|..|..|:|.::             .|.|
  Fly    66 RRAAGSNWMAAAGGGAAAAAGSENQDAKATESAPLSKSARMRMKKKAHRNRILAMDCEMVGVGHN 130

  Fly  1067 ----SVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSY 1127
                .:||:|.:...|..    .:|.|:..:::|.||.|..|||:|.|: ||  .:...|::...
  Fly   131 TRDDMLARVSIVNRMGHV----LLDKYVKPRKEVTDYRTSVSGIRPQDI-AN--GEDFAAVQNEV 188

  Fly  1128 QKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMV------SLRFLAWHFL 1186
            .||.:    |.|.|||||:||..|:.|..|...|.||.|  :.|..:::      ||:.|....|
  Fly   189 MKLIH----GRILVGHGLRNDLAVLGIRHPFHDIRDTSH--YKPLCKLISNTHTPSLKRLTKAVL 247

  Fly  1187 GTKIQSETHDSIEDARTTLQLYKH----YLKLQEEKK 1219
            |.:||:..|:|:||||..:.:|..    :.|..|:|:
  Fly   248 GQEIQTGEHNSVEDARAAMGIYNRVAVDWEKYLEKKR 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PAN2	NP_610427.2	WD40	63..>270	CDD:475233
		WD40 repeat	148..183	CDD:293791
		WD40 repeat	187..221	CDD:293791
		WD40 repeat	227..273	CDD:293791
		WD40 repeat	278..314	CDD:293791
		UCH_1	505..940	CDD:463872
		zf-CCCH_2	799..816	CDD:464217
		PAN2_exo	1036..1209	CDD:99846	58/201 (29%)
CG6833	NP_648689.1	REX4_like	118..270	CDD:99847	52/164 (32%)