DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and ISG20

DIOPT Version :8

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_001290162.1 Gene:ISG20 / 3669 HGNCID:6130 Length:181 Species:Homo sapiens

Alignment Length:191 Identity:61/192 (32%)
Similarity:85/192 (44%) Gaps:38/192 (20%)


  Fly  1029 MPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQ 1093
            |..|.::||||.|.|.|.|.    |..|           :||.|.:.    ..|....|.:|..:
Human     1 MAGSREVVAMDCEMVGLGPH----RESG-----------LARCSLVN----VHGAVLYDKFIRPE 46

  Fly  1094 EKVVDYLTQFSGIKPGDL--DANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYV 1156
            .::.||.|:.||:.|..:  ...|:..||..|    |.||     |.:.|||.||:||:.:...:
Human    47 GEITDYRTRVSGVTPQHMVGATPFAVARLEIL----QLLK-----GKLVVGHDLKHDFQALKEDM 102

  Fly  1157 PSEQIIDTV------HLFHMPHHRMVSLRFLAWHFLGTKIQSET--HDSIEDARTTLQLYK 1209
            ....|.||.      ....:.|.|.||||.|:...|...||:..  |.|:||||.|::||:
Human   103 SGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ 163

Known Domains:


GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:330360
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:315986
zf-CCCH_2 799..816 CDD:317060
PAN2_exo 1036..1209 CDD:99846 59/183 (32%)
ISG20NP_001290162.1 DnaQ_like_exo 8..163 CDD:324557 59/183 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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