Protein Alignment PAN2 and rexo4

DIOPT Version :8

• Sequence 1: NP_610427.2
• Gene: PAN2 / 35893
• FlyBaseID: FBgn0033352
• Length: 1241
• Species: Drosophila melanogaster
• Sequence 2: XP_002665913.1
• Gene: rexo4 / 100333127
• ZFINID: ZDB-GENE-050411-124
• Length: 418
• Species: Danio rerio
• Alignment Length: 404
• Identity: 91/405 (22%)
• Similarity: 148/405 (37%)
• Gaps: 107/405 (26%)

  Fly   815 HPDRKSPSHTSQPNAVNNSPNGRQKSWFPLTFTMGINDQGEVQVQTQSDASSGKSEQEEETEKPP 879
            :|::|:.. |.|....|  .||:||...|..     :.:.|.:.:...:....:||:.:..||..
Zfish    78 NPEKKNEG-TGQIKDAN--VNGKQKPSSPKD-----SHKPEKRFKKAKETVKAESEKSKRVEKDG 134

  Fly   880 --TKGLDNNRMYALHAVVCQVDDGTQKNLVSLINVQRPYHTMKLAESADDPQSQWYIFNDFSISP 942
              |.|.:.:......|...:..||.:|.             |.....|::.:.:
Zfish   135 ELTNGKEQSGHKQFKAEKRKNKDGKEKG-------------MNKKSKAEEEEKK----------- 175

  Fly   943 VSPQESVWFTLDWKVPCILFYRHVEDDSESASTTSSTVTESEETIPSES--SSGSPTNLSNPFLE 1005
             :.:..:||                ||.:.....|:..||:.:.:....  :...|.|.....::
Zfish   176 -TAEPDLWF----------------DDVDPDDIESALGTEAADIMRKRCGLAKCDPKNTEKMLVK 223

  Fly  1006 EIVSPMLGNLSADATLQPLQSDEMPQSGDLVAMDAEFVTLNPE-ENEIRPDGKTATIKPCHMSVA 1069
            |  ....|...|                  ||||.|.|.:..: |:.|               :|
Zfish   224 E--HAFEGVTRA------------------VAMDCEMVGVGYKGEDSI---------------LA 253

  Fly  1070 RISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLV 1134
            |:|.:...|..    ..|.|:...|||.||.|..|||:|.|:......|  |..|...|.||
Zfish   254 RVSLVNHFGKC----IYDKYVKPTEKVTDYRTAVSGIRPDDIKNGEDIK--TVQKEVAQILK--- 309

  Fly  1135 DVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMV-----SLRFLAWHFLGTKIQSET 1194
              |.|.|||.:.||.:::.:..|.:.|.||..  :.|..:.|     :||.|....|..::|...
Zfish   310 --GRILVGHAIHNDLKILLLDHPKKMIRDTQR--YKPFRQKVKSSRPALRNLCRQILNVQVQQGE 370

  Fly  1195 HDSIEDARTTLQLY 1208
            |.|::||:.|::||
Zfish   371 HSSVQDAQATMRLY 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PAN2	NP_610427.2	WD40	63..>270	CDD:330360
		WD40 repeat	148..183	CDD:293791
		WD40 repeat	187..221	CDD:293791
		WD40 repeat	227..273	CDD:293791
		WD40 repeat	278..314	CDD:293791
		UCH_1	505..940	CDD:315986	23/127 (18%)
		zf-CCCH_2	799..816	CDD:317060	0/1 (0%)
		PAN2_exo	1036..1209	CDD:99846	56/180 (31%)
rexo4	XP_002665913.1	DnaQ	231..>384	CDD:223916	56/199 (28%)
		REX4_like	234..385	CDD:99847	56/180 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG0847
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900