Protein Alignment PAN2 and rexo5

DIOPT Version :8

• Sequence 1: NP_610427.2
• Gene: PAN2 / 35893
• FlyBaseID: FBgn0033352
• Length: 1241
• Species: Drosophila melanogaster
• Sequence 2: NP_001121457.1
• Gene: rexo5 / 100158551
• XenbaseID: XB-GENE-980884
• Length: 784
• Species: Xenopus tropicalis
• Alignment Length: 320
• Identity: 82/321 (26%)
• Similarity: 131/321 (41%)
• Gaps: 76/321 (24%)

  Fly   901 GTQKNLVSLINVQRPYHTMKLAESADDPQSQWYIFNDFSISPVSPQESVWFTLDWKVPCILFYRH 965
            |.:||..|.|..|. :.:::...|..||.         ..:.:|.:....|..|   |.:|.|
 Frog   143 GAEKNGTSDIKKQE-FRSLQANFSLKDPA---------ETACLSGEIGETFKHD---PIVLKY-- 192

  Fly   966 VEDDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGNLSADATLQPLQSDEMP 1030
               .:|....|...:::.|.........|||.::      :.|:   ...|.:.|      |:.|
 Frog   193 ---GTEQLGLTRYLLSQEEMRKNKYPLVGSPDSI------DYVN---SGCSREIT------DDSP 239

  Fly  1031 QSGDLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEK 1095
                |..:|.| :.|..:.:|:                .|||.:    .|.|...||:.:.....
 Frog   240 ----LFGLDCE-MCLTDKGSEL----------------TRISLV----DASGSCIMDELVKPDNT 279

  Fly  1096 VVDYLTQFSGIKPGDLDANFSKKRL----TALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYV 1156
            :.||:|::|||         ::|.|    |.||...||||.::....:.|||.|.||.|.:.:..
 Frog   280 IRDYMTRYSGI---------TRKLLLPVKTKLKDVQQKLKSVLPPDAVLVGHSLDNDLRALQMIH 335

  Fly  1157 PSEQIIDTVHLFHMPHHRMVSLRFLAWHFLGTKIQSET---HDSIEDARTTLQLYKHYLK 1213
            .|  :|||..||...:.|...|:|||...||.:||::.   |...||||..|.|.:::::
 Frog   336 TS--VIDTALLFAREYGRKFRLKFLAQAVLGREIQTDDVMGHCPAEDARAALNLAQYFIQ 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PAN2	NP_610427.2	WD40	63..>270	CDD:330360
		WD40 repeat	148..183	CDD:293791
		WD40 repeat	187..221	CDD:293791
		WD40 repeat	227..273	CDD:293791
		WD40 repeat	278..314	CDD:293791
		UCH_1	505..940	CDD:315986	9/39 (23%)
		zf-CCCH_2	799..816	CDD:317060
		PAN2_exo	1036..1209	CDD:99846	55/180 (31%)
rexo5	NP_001121457.1	REX1_like	241..389	CDD:99848	55/180 (31%)
		DnaQ	243..414	CDD:223916	55/184 (30%)
		RRM1_NEFsp	535..605	CDD:240719
		RRM2_NEFsp	631..701	CDD:240720

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG0847
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900