DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and YARS1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_003671.1 Gene:YARS1 / 8565 HGNCID:12840 Length:528 Species:Homo sapiens


Alignment Length:268 Identity:119/268 - (44%)
Similarity:155/268 - (57%) Gaps:47/268 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ELIKENAA-------LAKEVEAALAQLVQLELRNGKKQIPVPGARGFCTSAAPVVMPAEAGPATA 125
            :|.|:.||       |...||.||.:|:.            |....|.|       ||....|:|
Human   294 DLEKDFAAEVVHPGDLKNSVEVALNKLLD------------PIREKFNT-------PALKKLASA 339

  Fly   126 APAAPAPKPAKEPKEKKSKEKKPAAEKPAAAPEAPVDV--GRLDLRVGKIVEVGRHPDADSLYLE 188
            |    .|.|:|:         ||.|:.||...| |.:|  .|||:|||||:.|.:||||||||:|
Human   340 A----YPDPSKQ---------KPMAKGPAKNSE-PEEVIPSRLDIRVGKIITVEKHPDADSLYVE 390

  Fly   189 KIDCGEAAPRTVVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCASTP---EKVEVL 250
            |||.|||.|||||||||:|||.||:|:|||||:|||||.|||||.|:.|::|||..   .:||.|
Human   391 KIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPL 455

  Fly   251 SPPAGAVPGDLVHCEGYPR-QPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVA 314
            .||||:.||:.|..:||.: |||.:|.||||:||....|.|.:.|.:|.:|.... :...|::..
Human   456 DPPAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNF-MTKLGSISC 519

  Fly   315 QTLKNVNV 322
            ::||..|:
Human   520 KSLKGGNI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 10/29 (34%)
PLN02610 <161..304 CDD:215329 87/148 (59%)
YARS1NP_003671.1 nt_trans 8..328 CDD:469580 11/45 (24%)
'HIGH' region. /evidence=ECO:0000269|PubMed:14671330 44..52
'KMSKS' region. /evidence=ECO:0000269|PubMed:14671330 222..226
Nuclear localization signal. /evidence=ECO:0000269|PubMed:22291016 242..247
PLN02610 <327..528 CDD:215329 108/223 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..363 12/37 (32%)
Blue background indicates that the domain is not in the aligned region.

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