DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AIMP1 and aimp1b

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001008592.3 Gene:aimp1b / 494049 ZFINID:ZDB-GENE-041212-13 Length:301 Species:Danio rerio


Alignment Length:300 Identity:104/300 - (34%)
Similarity:170/300 - (56%) Gaps:33/300 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QQIASNNERAEALINSIEAEISGIQQQLVERQKQELIKENAALAKEVEAALAQLVQLELRN---- 94
            |||....|:|     .::|.:         |::::|:.|||.|.|:::         :|:|    
Zfish    25 QQILFLKEKA-----MLQASV---------REEKKLLVENAKLKKDID---------DLKNLLQD 66

  Fly    95 --GKKQIPVPGARGFCTS-AAPVVMPAEAGPAT-AAPAAPAPKPAKEPKEKKSKEKKPAAEKPAA 155
              .:|.:.:...|....| |:......|..|.| .||:|...........::.:|::..:.:...
Zfish    67 TQKRKAVKLRQERALSASIASTSAQLGEPAPFTHTAPSATQTHAHTHHDGRRRRERRGVSCESVC 131

  Fly   156 --APEAPVDVGRLDLRVGKIVEVGRHPDADSLYLEKIDCGEAAPRTVVSGLVKFVPLEEMQNRLV 218
              :.|..:||.||||||.:|::|.:|||::|||:::::.||.|||||||||...||.|::...||
Zfish   132 VLSREQKLDVSRLDLRVARILDVRKHPDSESLYVQEVELGEHAPRTVVSGLTNHVPPEQLLGSLV 196

  Fly   219 VVMCNLKPAKMRGVTSEAMVMCASTPEKVEVLSPPAGAVPGDLVHCEGYPRQPDAQLNPKKKIFE 283
            |::||::..|:|||.|:|.::||...|::|.|:||.||.|||.|..:.||.:|:.:||||::::|
Zfish   197 VLLCNVRSVKVRGVQSQARLLCAVNQERMEPLTPPTGAQPGDRVTFQLYPGEPEKELNPKQRLWE 261

  Fly   284 SCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKNVNVK 323
            ...|||:.:...||.|:|.|..|.|||...|..:.:.|:|
Zfish   262 RLLPDLRIDARGVATYRGVAFEVRGKGLCRAPNITSGNIK 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 13/56 (23%)
PLN02610 <161..304 CDD:215329 69/142 (49%)
aimp1bNP_001008592.3 None

Return to query results.
Submit another query.