DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and yars1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001004987.1 Gene:yars1 / 448444 XenbaseID:XB-GENE-491608 Length:528 Species:Xenopus tropicalis


Alignment Length:330 Identity:105/330 - (31%)
Similarity:163/330 - (49%) Gaps:65/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LINSIEAEISGIQQQLVERQ-KQELIKENAALAKEVEAALAQLVQLE------------------ 91
            |:|.:...::|.:....|.: |.:|:...|.:.|:::.|..:...:|                  
 Frog   210 LMNPMVPGLTGAKMSSSEEESKIDLLDSPADVKKKLKKAFCEPGNIENNGVLSFVRHVLFPLKSE 274

  Fly    92 ---LRNGK------------------KQIPVPGARGFCTSAAPVVMPAEAGPATAAPAAPAPKPA 135
               ||:.|                  :|:..||.           :.|....|......|..:..
 Frog   275 FVVLRDEKFGGNKTYTDFETLEKDFTEQLVHPGD-----------LKASVEKALNKLLDPIREKF 328

  Fly   136 KEPKEKK-SKEKKPAAEKPAAAPEA--------PVDVGRLDLRVGKIVEVGRHPDADSLYLEKID 191
            ..|:.|| |.:..|.|.|....|:.        .:|...||||||||:.|.:||||||||:|.:|
 Frog   329 NSPEMKKLSNDAYPGASKQKTVPKGSTKNSGPEEIDPSLLDLRVGKILSVRQHPDADSLYVESVD 393

  Fly   192 CGEAAPRTVVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCAST---PEKVEVLSPP 253
            .||..||.||||||::||.:::..|.||::|||||.||||:.|:.|::||||   .::||.|.||
 Frog   394 VGEENPRCVVSGLVQYVPSDQLLGRSVVLLCNLKPQKMRGIESQGMLLCASTEGEQKQVEPLDPP 458

  Fly   254 AGAVPGDLVHCEGYPR-QPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTL 317
            .|:.||:.::.|||.. :|:.:|.||||:||....|.:.:.:|.|.:||... :...|:|..:||
 Frog   459 TGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNF-LTKLGSVTCKTL 522

  Fly   318 KNVNV 322
            :..::
 Frog   523 RGGSI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 9/45 (20%)
PLN02610 <161..304 CDD:215329 74/146 (51%)
yars1NP_001004987.1 nt_trans 8..337 CDD:469580 22/137 (16%)
'HIGH' region. /evidence=ECO:0000250|UniProtKB:P54577 44..52
'KMSKS' region. /evidence=ECO:0000250|UniProtKB:P54577 222..226 0/3 (0%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P54577 242..247 1/4 (25%)
PLN02610 <271..528 CDD:215329 95/269 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..364 6/28 (21%)
Blue background indicates that the domain is not in the aligned region.

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