DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AIMP1 and mars1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_068077760.1 Gene:mars1 / 338183 ZFINID:ZDB-GENE-030219-83 Length:942 Species:Danio rerio


Alignment Length:172 Identity:45/172 - (26%)
Similarity:67/172 - (38%) Gaps:33/172 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MADLQQIASNNERAEALINSIEAEISGIQQQLVERQKQELIKENAALAKEV-EAALAQLV-QLEL 92
            :..||.:|...:|.||.. .::..:|.::|.|.:|:...|..|..::|..| .|||..|: ....
Zfish   124 LQSLQLVALQGKRVEAAA-VMKEPLSWLEQSLSKRKASFLTDEVVSVADVVLWAALYPLLSDSAF 187

  Fly    93 RNGKKQIPVPGARGF---------CTSAAPVVMP---AEA-------GPATAAPAAPAPKPAKEP 138
            ..|..|    ..||:         |.|||..|:.   |||       .|.|..|...:|..:.| 
Zfish   188 EPGDLQ----AVRGWFERVCSVSACQSAALRVLQGKGAEALKSFLQKQPVTHTPRRDSPSNSTE- 247

  Fly   139 KEKKSKEKKPAAEKPAAAPEAPVDVGRLDLRVGKIVEVGRHP 180
            .|...:|..|...:.||      .|....|:...:|...:||
Zfish   248 AEDSERELSPEEIEEAA------QVYSEGLKDFTVVTERKHP 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 18/62 (29%)
PLN02610 <161..304 CDD:215329 5/20 (25%)
mars1XP_068077760.1 GST_N_5 30..101 CDD:436537
GST_C_MetRS_N 104..205 CDD:198340 22/85 (26%)
PLN02610 279..917 CDD:215329 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.