DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AIMP1 and Mars2

DIOPT Version :8

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_001066991.2 Gene:Mars2 / 316403 RGDID:1311527 Length:586 Species:Rattus norvegicus

Alignment Length:136 Identity:28/136 - (20%)
Similarity:44/136 - (32%) Gaps:42/136 - (30%)


  Fly     1 MLRRAA------TTVGSACKNYGQNCSKFARNKRTMADLQQIASNNERAEALINSIEAEISGIQQ 59
            |||:.|      |..|..|:.| .:||..|            :.:...|.|...:          
  Rat     1 MLRQCALWVLTRTPAGRGCRRY-SSCSPSA------------SGDAREARAYFTT---------- 42

  Fly    60 QLVERQKQELIKENAA--LAKEVEAALAQLVQLELRNGKKQIPVPGARGFCTSAAPVVMPAEAGP 122
                    .:...|||  :.....|.||..:   .|:.:.::|..|:..|.|......:..:...
  Rat    43 --------PIFYVNAAPHIGHLYSALLADAL---CRHRRLRVPGSGSTRFSTGTDEHGLKIQQAA 96

  Fly   123 ATAAPA 128
            |||..|
  Rat    97 ATAGLA 102

Known Domains:


GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 tRNA_bind_EMAP-II_like 161..262 CDD:239198
Mars2XP_001066991.2 MetRS_core 37..379 CDD:173907 16/87 (18%)
PRK11893 39..574 CDD:237012 15/85 (18%)
Anticodon_Ia_Met 388..532 CDD:153411
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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