DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and Mars1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_006241513.1 Gene:Mars1 / 299851 RGDID:1305321 Length:910 Species:Rattus norvegicus


Alignment Length:163 Identity:41/163 - (25%)
Similarity:59/163 - (36%) Gaps:51/163 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRRAATTVGSACKNYGQNCSKFARNKRTMAD----------LQQIASNNERAEALINSIE----- 51
            |||..|.:..:...  |||...|.:..::||          ||..|...|...||.:..:     
  Rat   117 LRRVLTHIDHSLSR--QNCPFLAGDTESLADIVLWGALYPLLQDPAYLPEELGALQSWFQTLSTQ 179

  Fly    52 -----AEISGIQQQLV---------ERQKQELIKENAALAKE-VEAALAQLVQLEL-------RN 94
                 |..:.::||.|         :.|.|.|..|..|::.| .|..||.|.:.::       ..
  Rat   180 EPCQRAAETVLKQQGVLALRPYLQKQPQPQPLPPEGRAVSNEPEEEELATLSEEDIIAAVAAWEK 244

  Fly    95 GKKQ-----------IPVPGARG-FCTSAAPVV 115
            |.:.           :||||.|. ..|||.|.|
  Rat   245 GLENLPPLQPQQHPVLPVPGERNVLITSALPYV 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 23/97 (24%)
PLN02610 <161..304 CDD:215329
Mars1XP_006241513.1 GST_N_5 1..74 CDD:436537
GST_C_MetRS_N 77..179 CDD:198340 16/63 (25%)
PLN02610 258..>839 CDD:215329 10/20 (50%)
MetRS_RNA 855..899 CDD:238475
Blue background indicates that the domain is not in the aligned region.

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