DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and yrs1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_587876.1 Gene:yrs1 / 2539269 PomBaseID:SPCC1672.05C Length:401 Species:Schizosaccharomyces pombe


Alignment Length:93 Identity:24/93 - (25%)
Similarity:43/93 - (46%) Gaps:19/93 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LINSIEAEISGIQQQLVERQKQ-----ELIKENAALAKEVEAALAQLVQLELRNGKKQIPVPGAR 105
            |.:|:...::|:|:||    ||     .::|......|:::.|:.|..| :.:|.||.       
pombe   317 LESSVNTLLAGVQEQL----KQYPDLDSILKAAYPDPKDLKKAMKQKKQ-DKKNAKKA------- 369

  Fly   106 GFCTSAAPVVMPAEAGPATAAPAAPAPK 133
              .|:.|.:...:.|.|||.:..|.:.|
pombe   370 --GTTNASIAAESGAAPATESQTAESFK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 13/49 (27%)
PLN02610 <161..304 CDD:215329
yrs1NP_587876.1 nt_trans 6..338 CDD:469580 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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