DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and Mars1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001165053.1 Gene:Mars1 / 216443 MGIID:1345633 Length:910 Species:Mus musculus


Alignment Length:164 Identity:41/164 - (25%)
Similarity:58/164 - (35%) Gaps:53/164 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRRAATTVGSACKNYGQNCSKFARNKRTMAD----------LQQIASNNERAEALINSIE----- 51
            |||..|.:..:...  |||...|.:..::||          ||..|...|...||.:..:     
Mouse   117 LRRVLTHIDHSLSR--QNCPFLAGDTESLADIVLWGALYPLLQDPAYLPEELGALQSWFQTLSTQ 179

  Fly    52 -----AEISGIQQQ-------LVERQKQ-------------ELIKENAALAKEV---------EA 82
                 |..:.::||       .:::|.|             ||.:|..|...|.         |.
Mouse   180 EPCQRAAETVLKQQGVLALRLYLQKQPQPQPPPPEGRTVSNELEEEELATLSEEDIVTAVAAWEK 244

  Fly    83 ALAQLVQLELRNGKKQIPVPGARG-FCTSAAPVV 115
            .|..|..|:|:. ...:||||.|. ..|||.|.|
Mouse   245 GLESLPPLKLQQ-HPVLPVPGERNVLITSALPYV 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 22/116 (19%)
PLN02610 <161..304 CDD:215329
Mars1NP_001165053.1 GST_N_5 1..74 CDD:436537
GST_C_MetRS_N 77..179 CDD:198340 16/63 (25%)
PLN02610 258..>848 CDD:215329 10/20 (50%)
'HIGH' region 275..285 2/3 (67%)
'KMSKS' region 595..599
MetRS_RNA 855..899 CDD:238475
Blue background indicates that the domain is not in the aligned region.

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