DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and mars-1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001255570.1 Gene:mars-1 / 178089 WormBaseID:WBGene00003415 Length:917 Species:Caenorhabditis elegans


Alignment Length:311 Identity:143/311 - (45%)
Similarity:188/311 - (60%) Gaps:16/311 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SKFARNKRTMADLQQIASNNERAEALINSIEAEISGIQQQ---LVERQKQELIKENAALAKEVEA 82
            :|..:..:.||.........:.|:.:...|...:....|.   ....|.|.|..||..|..:|:.
 Worm   615 TKDKKGDKKMASTAAFVELEQGAKVISQLIAQNLKKFDQAKALFTRNQLQRLDGENKQLTIDVKT 679

  Fly    83 ALAQLVQLELRNGKKQIPVPGARGFCTSAAPVVMPAEA----GPATAAPAAPAPKPAKEPKEKKS 143
            ...||::||...|.||:|.|...  || ..|...||..    .|...||:.|||   .||  ||:
 Worm   680 LQHQLIELETAAGIKQVPKPVVS--CT-PTPTSTPASGIITEAPKKEAPSTPAP---SEP--KKA 736

  Fly   144 KEKKPAAEKPAAAP-EAPVDVGRLDLRVGKIVEVGRHPDADSLYLEKIDCGEAAPRTVVSGLVKF 207
            ||:|......|||| :..:||||||:|||:|::..:|||||:||:|:||.||:||||||||||:.
 Worm   737 KEQKKGKGGAAAAPVDDTIDVGRLDMRVGRIIKCEKHPDADALYVEQIDVGESAPRTVVSGLVRH 801

  Fly   208 VPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCASTPEKVEVLSPPAGAVPGDLVHCEGYPRQPD 272
            |||::||||||||:|||||||||||.|.|||||||:|:|||::..||.:.||..|.|..|..:||
 Worm   802 VPLDQMQNRLVVVLCNLKPAKMRGVESRAMVMCASSPDKVEIMEVPADSKPGTPVVCPPYTHRPD 866

  Fly   273 AQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKNVNVK 323
            .||||||||:|:.|.|||.:.|..|.:||..|.:..:..:.|.||:.|:||
 Worm   867 EQLNPKKKIWETVAEDLKVSAEGFAEWKGQPLLIGSESKMTAPTLRGVHVK 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 14/70 (20%)
PLN02610 <161..304 CDD:215329 92/142 (65%)
mars-1NP_001255570.1 PLN02610 21..898 CDD:215329 136/290 (47%)

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