DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and Aimp1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_446209.1 Gene:Aimp1 / 114632 RGDID:620466 Length:315 Species:Rattus norvegicus


Alignment Length:319 Identity:151/319 - (47%)
Similarity:206/319 - (64%) Gaps:15/319 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CKNYGQNCSKFARNKRTMADLQQIASNNERAEALINSIEAEISGIQQ----QLVERQKQELIKEN 73
            |:.:|    |.|.|...:..|:|   ....|:.:|..::.:::.:::    |...|::::|..||
  Rat     4 CRFWG----KMATNDAVLKRLEQ---KGAEADQIIEYLKQQVALLKEKAILQATLREEKKLQVEN 61

  Fly    74 AALAKEVEAALAQLVQLELRNGKKQIPVPGARGF---CTSAAPVVMPAEAGPATAAPAAPAPKPA 135
            |.|.||:|....:|:|.|:.||.||:|||.:...   |:.:..|...|.....|........|..
  Rat    62 AKLKKEIEELKQELIQAEIHNGVKQVPVPSSSSLETHCSVSESVTRSASVTTTTMTGGGGEEKKV 126

  Fly   136 KEPKEKKSKEKKPAAEKPAAAPEA-PVDVGRLDLRVGKIVEVGRHPDADSLYLEKIDCGEAAPRT 199
            ||..|||.::|:...:..||:.:: ||||.|||||:|.||...:||||||||:|::|.|||||||
  Rat   127 KEKTEKKGEKKEKKQQSAAASADSKPVDVSRLDLRIGCIVTAKKHPDADSLYVEEVDVGEAAPRT 191

  Fly   200 VVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCASTPEKVEVLSPPAGAVPGDLVHC 264
            ||||||..||||:||||:||::|||||||||||.|:|||||||:|||||:|:||.|:||||.:..
  Rat   192 VVSGLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVMCASSPEKVEILAPPNGSVPGDRITF 256

  Fly   265 EGYPRQPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKNVNVK 323
            :.:|.:||.:|||||||:|...|||.||.|.||.||||...|.|||...|||:.|..:|
  Rat   257 DAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGAPFEVKGKGVCRAQTMANSGIK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 18/71 (25%)
PLN02610 <161..304 CDD:215329 99/142 (70%)
Aimp1NP_446209.1 PRK05431 14..>93 CDD:235461 24/81 (30%)
PLN02610 <146..315 CDD:215329 109/168 (65%)

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