DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and Yars1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_598912.5 Gene:Yars1 / 107271 MGIID:2147627 Length:528 Species:Mus musculus


Alignment Length:268 Identity:121/268 - (45%)
Similarity:154/268 - (57%) Gaps:47/268 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ELIKENAA-------LAKEVEAALAQLVQLELRNGKKQIPVPGARGFCTSAAPVVMPAEAGPATA 125
            ||.|:.||       |...||.||.:|:.            |....|.|       ||....|:|
Mouse   294 ELEKDFAAEVVHPGDLKNSVEVALNKLLD------------PIREKFNT-------PALKKLASA 339

  Fly   126 APAAPAPKPAKEPKEKKSKEKKPAAEKPAAAPEAPVDV--GRLDLRVGKIVEVGRHPDADSLYLE 188
            |    .|.|:|:         ||.|:.||...| |.:|  .|||:|||||:.|.:||||||||:|
Mouse   340 A----YPDPSKQ---------KPPAKGPAKNSE-PEEVIPSRLDIRVGKILSVEKHPDADSLYVE 390

  Fly   189 KIDCGEAAPRTVVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCAS---TPEKVEVL 250
            |||.|||.|||||||||:|||.||:|:|||||:|||||.|||||.|:.|::|||   ...:||.|
Mouse   391 KIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPL 455

  Fly   251 SPPAGAVPGDLVHCEGYPR-QPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVA 314
            .||||:.||:.|..:||.: |||.:|.||||:||....|.|.:.|.:|.:|.... :...|.|..
Mouse   456 DPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNF-MTKLGFVSC 519

  Fly   315 QTLKNVNV 322
            ::||..|:
Mouse   520 KSLKGGNI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 11/29 (38%)
PLN02610 <161..304 CDD:215329 87/148 (59%)
Yars1NP_598912.5 nt_trans 8..328 CDD:469580 12/45 (27%)
'HIGH' region. /evidence=ECO:0000250|UniProtKB:P54577 44..52
'KMSKS' region. /evidence=ECO:0000250|UniProtKB:P54577 222..226
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P54577 242..247
PLN02610 <327..528 CDD:215329 109/223 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..363 12/37 (32%)
Blue background indicates that the domain is not in the aligned region.

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