DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8237 and fam8a1b

DIOPT Version :10

Sequence 1:NP_610425.1 Gene:CG8237 / 35891 FlyBaseID:FBgn0033350 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001017551.1 Gene:fam8a1b / 548347 ZFINID:ZDB-GENE-050410-14 Length:326 Species:Danio rerio


Alignment Length:344 Identity:89/344 - (25%)
Similarity:143/344 - (41%) Gaps:84/344 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GEQGEETGQKLTERSTKEAYFESLAEWAKQATLAQNAMLMFPYYL------------MANYPTMF 54
            |:|...|....||      |.|.|.||            |:.||.            ..::|..|
Zfish    32 GKQVNSTAVNTTE------YCEKLQEW------------MWQYYCSYMNWQSWIAMSALSFPPCF 78

  Fly    55 PGLPSSAALQAAAMGQ-----------------PQALVQGSAAAPGEPAAEP-RLPAPNFSGLRI 101
            |...::.:....|.|.                 |.|.|..:|.|.|:.:|.| ..||......:.
Zfish    79 PTQGATESHGTTAWGTDMSNGDLRNWLNNPFGFPAAAVNVAAPANGQSSAAPATAPAQILQQQQA 143

  Fly   102 LGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDMFILFIVKIIITFGVVNLFNI----EFDEDVI 162
            .|.|.|       .|.||.:....:|.:||.:|.||||.:|..|...:|:|..:    :|....|
Zfish   144 NGNAQQ-------PGREYSIPSPLQRFIAEMVDFFILFFIKATIIISIVHLSGMKDISKFAMHFI 201

  Fly   163 RRTLDQEDLFSNFFDTSLDFISMSTDLLLIEMLTKFIVCCYEALWTYLYQGATPGKSLMKIRIYY 227
            ...:|:        |||::.:.   .::|:.::.:.:||.||.:..:...||||||.|:.:|:..
Zfish   202 VEEIDE--------DTSMEELQ---KMMLVALVYRILVCFYEIICIWGAGGATPGKFLIGLRVVT 255

  Fly   228 VEAVMPLQGPPLPQFVLQPQREPMRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLMVFFKN 292
            .::.:.:|              |.|..:.|....:|..|..|||.||..:...||..:.::||::
Zfish   256 CDSSVLVQ--------------PNRVRVVPATNVTLSASTVRALNKNFSIAFFFPAFITLLFFQH 306

  Fly   293 NRTAYDVLTKTIVVESNSI 311
            |||.||::..||||:.:.:
Zfish   307 NRTVYDIVAGTIVVKRHRL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8237NP_610425.1 YckC 118..306 CDD:441320 55/191 (29%)
fam8a1bNP_001017551.1 YckC 153..322 CDD:441320 57/193 (30%)

Return to query results.
Submit another query.