DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt and Ctnna3

DIOPT Version :10

Sequence 1:NP_610423.3 Gene:Spt / 35889 FlyBaseID:FBgn0033348 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_808280.2 Gene:Ctnna3 / 216033 MGIID:2661445 Length:895 Species:Mus musculus


Alignment Length:405 Identity:78/405 - (19%)
Similarity:147/405 - (36%) Gaps:103/405 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RNNAAAANWLNDLCAVLLEFATLAHSSFCSQGQSECSELVCLCLSQIMICIRQVENTMKLECGTT 81
            |:..|.|.      |.|.|.:.|.| |.|| ...|.|::..|..|:..:| .:::|.:.:     
Mouse   201 RDEIAGAR------ATLKENSPLLH-SICS-ACLEHSDVASLKASKDTVC-EEIQNALDV----- 251

  Fly    82 VSVSHQYFLDRIRWCLKRLMHLYSEESSSEAVAPERSFLKLVDGALDCLAQFTSHSEENTDTSN- 145
              :|:                  :.:....|.||.......:..|.|.|        ||....| 
Mouse   252 --ISN------------------ASQGIQNAPAPPEPQAATLGSAFDEL--------ENLIVLNP 288

  Fly   146 CPKTPKEVLP-LSQKLRANIDLILGQSLGFANVALSQDKRALSALCQKVIRECNAFQEECKESFS 209
            ...|.::|.| |.::|.|   :|.|.:| .|:.:.::|...     :::|.||||.::..::..:
Mouse   289 LTVTEEDVRPSLEKRLEA---IISGAAL-LADSSCTRDLHR-----ERIIAECNAIRQALQDLLT 344

  Fly   210 ANYLSTLKL-RAMTMEQAIYQLE---------------DFINDALLRLVFTCFLDFEKFSVDKIR 258
            ....:|.|. |:.|:..||..:.               |.|:|:.|.......:..|.....:::
Mouse   345 EYMSNTGKTERSNTLNTAIVNMSKKTRDLRRQLRKAIIDHISDSFLDTTVPLLVLIEAAKNGRVK 409

  Fly   259 ALLRNSPDNDDLADEFIADFDVNIDRATQIGIFAISFAPNLKMKTIMRSCLASFESLDTTLIPSL 323
            .:           .::.|.|..:..|..::...|.|.:.|.....|:|......|:|...:|.:.
Mouse   410 EI-----------KDYAAIFHEHTGRLVEVANLACSMSTNEDGIKIVRIAANHLETLCPQIINAA 463

  Fly   324 QAHGSDLHSDILEQHFNEEVAKFKAALQEIIDSRALVGCCLEILTSGISATEKLFDKQRLEDLVQ 388
            .|..|...|.:::    ..:..:|...:..|          .:||..:.      |...::|.:.
Mouse   464 LALASRPKSQVVK----NTMEMYKRTWEHYI----------HVLTEAVD------DITSIDDFLA 508

  Fly   389 ISLLLVEHFQLEVNR 403
            :|   ..|...:||:
Mouse   509 VS---ESHILEDVNK 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptNP_610423.3 Serendipity_A 1..468 CDD:368466 78/405 (19%)
Ctnna3NP_808280.2 Vinculin 18..856 CDD:460040 78/405 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 635..660
Blue background indicates that the domain is not in the aligned region.

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