Protein Alignment PGRP-SC2 and PGRP-LC

DIOPT Version :8

• Sequence 1: NP_610410.1
• Gene: PGRP-SC2 / 35862
• FlyBaseID: FBgn0043575
• Length: 184
• Species: Drosophila melanogaster
• Sequence 2: NP_001246693.1
• Gene: PGRP-LC / 39063
• FlyBaseID: FBgn0035976
• Length: 520
• Species: Drosophila melanogaster
• Alignment Length: 135
• Identity: 47/136 (35%)
• Similarity: 77/136 (57%)
• Gaps: 4/136 (3%)

  Fly    52 TAGNYCSTKAACITQLQNIQAYHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHAT--NWNSK 114
            |....|||:|.|:.:::.:|.|.::|....||.||||||||||||.|||||.||||..  |::|:
  Fly   385 TNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNFLIGGDGNVYVGRGWNKMGAHMNNINYDSQ 449

  Fly   115 SIGISFLGNYNTNTLTSAQITAAKGLLSDAVSRGQIVSGYILYGHRQV--GSTECPGTNIWNEIR 177
            |:..:::|::.|...::.|::..:.||...|..|:|...|......::  ..|:.....::....
  Fly   450 SLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKIAPSYRFTASSKLMPSVTDFKADALYASFA 514

  Fly   178 TWSNW 182
            .|::|
  Fly   515 NWTHW 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-SC2	NP_610410.1	PGRP	21..162	CDD:128941	44/112 (39%)
PGRP-LC	NP_001246693.1	PGRP	356..490	CDD:128941	44/105 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG5479
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000				FOG0000386
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR11022
RoundUp	0	0.000	Not matched by this tool.
	3	3.000