DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12780 and TCH4

DIOPT Version :10

Sequence 1:NP_610388.1 Gene:CG12780 / 35834 FlyBaseID:FBgn0033301 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_200564.1 Gene:TCH4 / 835860 AraportID:AT5G57560 Length:284 Species:Arabidopsis thaliana


Alignment Length:9 Identity:6/9 - (66%)
Similarity:7/9 - (77%) Gaps:0/9 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RDVELKDGD 76
            ||||:..||
plant    25 RDVEITWGD 33

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12780NP_610388.1 CBM39 6..97 CDD:464924 6/9 (67%)
TCH4NP_200564.1 GH16_XET 19..281 CDD:185685 6/9 (67%)

Return to query results.
Submit another query.