DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Lcp3 and Edg78E

Sequence 1:NP_001260803.1 Gene:Lcp3 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_001287140.1 Gene:Edg78E FlyBaseID:FBgn0000551 Length:122 Species:Drosophila melanogaster

Alignment Length:114 Identity:39/115 (34%)
Similarity:60/115 (52%) Gaps:6/115 (5%)


  Fly     1 MFKILLVCSLAALVAA---NANVEVKELVND-VQPDG-FVSKLVLDDGSASSATGDIHGNIDGVF 60
            |:|.|...:|.....|   |.:.:::...|| ...:| :.......:|......|:.:| ..|..
  Fly     1 MYKYLFCLALIGCACADNINKDAQIRSFQNDATDAEGNYQYAYETSNGIQIQEAGNANG-ARGAV 64

  Fly    61 EWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANP 109
            .::||||.|:.::|.|||.||.|..|.||||||:||.:|:|:.||..:|
  Fly    65 AYVSPEGEHISLTYTADEEGYHPVGDHLPTPPPVPAYVLRALEYIRTHP 113

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 14/41 (34%)
Edg78ENP_001287140.1 Chitin_bind_4 39..85 CDD:278791 14/47 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C131260280
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
22.030

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