DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Cpr49Af

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610775.1 Gene:Cpr49Af / 36352 FlyBaseID:FBgn0033729 Length:126 Species:Drosophila melanogaster


Alignment Length:128 Identity:47/128 - (36%)
Similarity:65/128 - (50%) Gaps:28/128 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KILLVCSLAALVAANA-----------NVEVK-------ELVNDVQPDGFVSKLVLDDGSASSAT 49
            |.|::.:| .:|||:|           |||..       ||     .||  || ...||...|..
  Fly     2 KYLMLIAL-FVVAASATDNDDPISQESNVEYNGKYHYHYEL-----KDG--SK-ATQDGVLKSVN 57

  Fly    50 GDIHG-NIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANPSK 111
            .|.:| :::|.:.:::.:|....|||.||||||....|.||||||.|.::|||:.||..:|.|
  Fly    58 ADHNGESVNGKYSFVADDGKTYVVSYTADENGYLAVGDHLPTPPPTPVSVLKALEYIRLHPYK 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 12/35 (34%)
Cpr49AfNP_610775.1 Chitin_bind_4 35..90 CDD:459790 20/62 (32%)

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