DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Lcp3 and Cpr47Ef

Sequence 1:NP_001260803.1 Gene:Lcp3 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610660.2 Gene:Cpr47Ef FlyBaseID:FBgn0033603 Length:612 Species:Drosophila melanogaster

Alignment Length:93 Identity:30/94 (32%)
Similarity:47/94 (50%) Gaps:9/94 (10%)


  Fly    20 VEVKELVNDVQPDG-FVSKLVLDDGSASSATGDIHG--------NIDGVFEWISPEGVHVRVSYK 75
            :.:...||:...|| :.......:|..:...|.:..        ::.|.:.:.:|||..|.:.|.
  Fly   134 IPILSFVNENDGDGNYRFSYETGNGIKAQEEGTVKNKGSENEIPSVMGSYSYTNPEGELVEIMYT 198

  Fly    76 ADENGYQPQSDLLPTPPPIPAAILKAIA 103
            |||||:.|..:.||||||||.||.|::|
  Fly   199 ADENGFVPSGNALPTPPPIPEAIAKSLA 226

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 13/49 (27%)
Cpr47EfNP_610660.2 Chitin_bind_4 149..204 CDD:278791 13/55 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C48384
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
22.030

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