DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Lcp3 and Cpr47Ed

Sequence 1:NP_001260803.1 Gene:Lcp3 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610658.1 Gene:Cpr47Ed FlyBaseID:FBgn0033601 Length:127 Species:Drosophila melanogaster

Alignment Length:101 Identity:27/102 (26%)
Similarity:43/102 (42%) Gaps:18/102 (18%)


  Fly     1 MFKILLV---CSL-----AALVAANANVEV-KELVNDVQPDGFVSKLVLDDG---------SASS 47
            ||.:||:   |.|     |...:.|..|.: |.:...:....::......||         |:.|
  Fly     1 MFALLLILTGCQLLWSCPAECTSINVPVPILKSVTEQLSSGSYLFSFESADGTYREELGIVSSDS 65

  Fly    48 ATGDIHGNIDGVFEWISPEGVHVRVSYKADENGYQP 83
            .|.|....:.|::.:|:..|..|.|.|.||:||:.|
  Fly    66 KTSDDDLEVSGIYRYINDWGQEVEVRYTADKNGFLP 101

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 16/50 (32%)
Cpr47EdNP_610658.1 Chitin_bind_4 43..99 CDD:278791 16/56 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
11.100

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