DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Lcp3 and Pcp

Sequence 1:NP_001260803.1 Gene:Lcp3 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_476673.1 Gene:Pcp FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster

Alignment Length:119 Identity:34/120 (28%)
Similarity:55/120 (46%) Gaps:18/120 (15%)


  Fly     5 LLVCSLAALVA----------ANANVEVKELVND--VQPDGFVSKLVLDDGSASSATGDIHGN-- 55
            |||..:.||..          .:::...:.|.||  |:.|| ..:...:..:..||:.:..|.  
  Fly     3 LLVNFIVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDG-KYRYAYETSNGISASQEGLGGVA 66

  Fly    56 IDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANP 109
            :.|...:.||||..:.|:|.|||.||.|....:   |.:|..||:::.||..:|
  Fly    67 VQGGSSYTSPEGEVISVNYVADEFGYHPVGAHI---PQVPDYILRSLEYIRTHP 117

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 14/43 (33%)
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 14/47 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C131259974
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
22.030

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