DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp3 and Cpr12A

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_572896.1 Gene:Cpr12A / 32309 FlyBaseID:FBgn0030494 Length:173 Species:Drosophila melanogaster


Alignment Length:116 Identity:30/116 - (25%)
Similarity:52/116 - (44%) Gaps:23/116 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCSLAALVAANANVEVKELVNDVQ---------PDG-FVSKLVLDDGSASSATG----- 50
            :|.|.|:.  |.|::|.   ::||.....:         ||| :..:..||||:|....|     
  Fly     8 LFAIFLLS--ATLISAQ---QIKESAPSARLLDRFDNRYPDGSYEYRFELDDGTARYERGYFVKI 67

  Fly    51 -DIHG-NIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTP-PPIPAAI 98
             |:.. .:.|.:.:...:|.::.|.|.||:.||:....:.|.. |.:|.:|
  Fly    68 NDVKTLMVVGYYAYRMTDGRYITVFYNADQFGYRQNQSITPQEYPNLPRSI 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 8/41 (20%)
Cpr12ANP_572896.1 Chitin_bind_4 46..100 CDD:459790 13/53 (25%)

Return to query results.
Submit another query.